RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 OTUB2Q96DC9 234 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 PELI1Q96FA3 418 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 KLHL42Q9P2K6 505 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SMIM35A0A1B0GVV1 85 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 F8VVB4 439 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 F8VWA3 439 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 NPC1O15118 1278 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 OGG1O15527 345 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 ZNF208O43345 1280 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 CD5P06127 495 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 CSF1P09603 554 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 SMIM10L2AP0DMW4 78 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 SMIM10L2BP0DMW5 78 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 HTRA4P83105 476 aaPredicted RBP12.13□□□□□ -0.47
IFT88-202ENST00000351808 TAF10Q12962 218 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 DHRS2Q13268 280 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 LBHQ53QV2 105 aaPredicted RBP12.13□□□□□ -0.47
IFT88-202ENST00000351808 PRAMEF17Q5VTA0 474 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 TAS1R1Q7RTX1 841 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 ARL14Q8N4G2 192 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 ZG16BQ96DA0 208 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 KIRREL1Q96J84 757 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 OR52D1Q9H346 318 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 SLC35A3Q9Y2D2 325 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 NLRC5Q86WI3 1866 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 DNAH12Q6ZR08 3092 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 TRIP12Q14669 1992 aaPredicted RBP12.13□□□□□ -0.47
IFT88-202ENST00000351808 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.13□□□□□ -0.47
IFT88-202ENST00000351808 GXYLT2A0PJZ3 443 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 SLC22A31A6NKX4 558 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 K7ERQ8 282 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 MFNGO00587 321 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 KIAA0355O15063 1070 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 ITGB2P05107 769 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 EDNRAP25101 427 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 PRKAG1P54619 331 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 EPHB3P54753 998 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 ZNF177Q13360 481 aaPredicted RBP12.13□□□□□ -0.47
IFT88-202ENST00000351808 KCNAB1Q14722 419 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 HYAL4Q2M3T9 481 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 PDZD11Q5EBL8 140 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 ZNF311Q5JNZ3 666 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 CD300LGQ6UXG3 332 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 ASB16Q96NS5 453 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 TUBA4BQ9H853 241 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 PLXNB3Q9ULL4 1909 aa12.13□□□□□ -0.47
IFT88-202ENST00000351808 LOC100509620A0A075B734 347 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 A0A1W2PPE2 198 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 M0QZQ0 153 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 RTCAO00442 366 aaKnown RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 KLF4O43474 513 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 MED6O75586 246 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 SIRPAP78324 504 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 HTRA3P83110 453 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 CDKN3Q16667 212 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 ADGRF1Q5T601 910 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 DNM1P46Q6ZS02 220 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 ZNF740Q8NDX6 193 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 CAMK1GQ96NX5 476 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 DOK5Q9P104 306 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 BCAT2O15382 392 aaPredicted RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 BRINP1O60477 761 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 MMP3P08254 477 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 ADRB3P13945 408 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 TEAD1P28347 426 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 IMPA1P29218 277 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 RBM34P42696 430 aaKnown RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 ID4P47928 161 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 PRKCZQ05513 592 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 TMEM115Q12893 351 aaPredicted RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 COL9A2Q14055 689 aaPredicted RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 VRK2Q86Y07 508 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 OR56B1Q8NGI3 324 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 MALSU1Q96EH3 234 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 TCTN2Q96GX1 697 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 SLC35G5Q96KT7 338 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 ELF4Q99607 663 aaPredicted RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 ACTRT3Q9BYD9 372 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 DPH1Q9BZG8 443 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 OR2S2Q9NQN1 319 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 CYTL1Q9NRR1 136 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 TAS2R8Q9NYW2 309 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 STEAP1Q9UHE8 339 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 GDF2Q9UK05 429 aaPredicted RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 TMEM184BQ9Y519 407 aaPredicted RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 TMEM202A6NGA9 273 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 EEF1E1-BLOC1S5C9J1V9 151 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 THY1P04216 161 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 LPAR6P43657 344 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 FXYD6P3P58550 94 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 SRSF4Q08170 494 aaKnown RBP12.12□□□□□ -0.47
IFT88-202ENST00000351808 NR0B2Q15466 257 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 STEAP1BQ6NZ63 245 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 FRRS1Q6ZNA5 592 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 OR4K17Q8NGC6 315 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 MAFIPQ8WZ33 124 aa12.12□□□□□ -0.47
IFT88-202ENST00000351808 SLC23A2Q9UGH3 650 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms