RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ENPP7Q6UWV6 458 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 IL34Q6ZMJ4 242 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 FRRS1Q6ZNA5 592 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 OR2L13Q8N349 312 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 RAB42Q8N4Z0 105 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 SNX33Q8WV41 574 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 SLC39A7Q92504 469 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 CRB3Q9BUF7 120 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 EXO5Q9H790 373 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 COMMD9Q9P000 198 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 SERTAD3Q9UJW9 196 aa13.67□□□□□ -0.22
TRAF3-202ENST00000351691 RNGTTO60942 597 aaKnown RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 CLUP10909 449 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 CSNK2A2P19784 350 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 ITPKBP27987 946 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 RPS15P62841 145 aaKnown RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 HABP2Q14520 560 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 METRNLQ641Q3 311 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF836Q6ZNA1 936 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 MISPQ8IVT2 679 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 SLC35F3Q8IY50 421 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 RFLNBQ8N5W9 214 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF433Q8N7K0 673 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 AMER3Q8N944 861 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF75AQ96N20 296 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 PDCD1LG2Q9BQ51 273 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 SLC25A21Q9BQT8 299 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 SLC25A18Q9H1K4 315 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 TCF7L1Q9HCS4 588 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 ASF1BQ9NVP2 202 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 NCDNQ9UBB6 729 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 TAC3Q9UHF0 121 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 GPR89AB7ZAQ6 455 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 WRBO00258 174 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 OR4E1P0C645 316 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 GKN3PP0CG01 181 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 GPR89BP0CG08 455 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 PTHLHP12272 177 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 HLA-GP17693 338 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 SSR2P43308 183 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 EEF1A1P68104 462 aaKnown RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 CEBPEQ15744 281 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 RNF212Q495C1 297 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 RAB12Q6IQ22 244 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 CORO6Q6QEF8 472 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 USP53Q70EK8 1073 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 ABHD13Q7L211 337 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 NDUFAF7Q7L592 441 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 STEAP2Q8NFT2 490 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 PFN4Q8NHR9 129 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 DUSP19Q8WTR2 217 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 BPIFA2Q96DR5 249 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 CNRIP1Q96F85 164 aaPredicted RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 BCL2L14Q9BZR8 327 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 SFXN1Q9H9B4 322 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 PRSS16Q9NQE7 514 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 MMP26Q9NRE1 261 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 C20orf141Q9NUB4 165 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 GNG8Q9UK08 70 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 PLAGL1Q9UM63 463 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 YBX2Q9Y2T7 364 aaKnown RBP13.66□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF337Q9Y3M9 751 aa13.66□□□□□ -0.22
TRAF3-202ENST00000351691 TMEM200CA6NKL6 621 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 COLCA2A8K830 154 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 AKR7A3O95154 331 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 FUT1P19526 365 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 PTAFRP25105 342 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 CFPP27918 469 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 ADH7P40394 386 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 NPBWR1P48145 328 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 PDX1P52945 283 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 DUSP8Q13202 625 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 ZNF234Q14588 700 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 SLC9A5Q14940 896 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 PEA15Q15121 130 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 GAB4Q2WGN9 574 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 NKAPLQ5M9Q1 402 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 STPG1Q5TH74 334 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 WDR88Q6ZMY6 472 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 OR51S1Q8NGJ8 323 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 OR13C2Q8NGS9 318 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 C2CD4CQ8TF44 421 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 RBM18Q96H35 190 aaKnown RBP13.65□□□□□ -0.22
TRAF3-202ENST00000351691 SMAD5Q99717 465 aaKnown RBP13.65□□□□□ -0.22
TRAF3-202ENST00000351691 TLNRD1Q9H1K6 362 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 NIT2Q9NQR4 276 aa13.65□□□□□ -0.22
TRAF3-202ENST00000351691 PDE4DIPQ5VU43 2346 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 MCIDASD6RGH6 385 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 IGHV2-70P01814 119 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 SLC6A6P31641 620 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 DLSTP36957 453 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 PNLIPRP2P54317 469 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 CLDN12P56749 244 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
TRAF3-202ENST00000351691 NAAAQ02083 359 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
TRAF3-202ENST00000351691 ANKRD16Q6P6B7 361 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 STAC2Q6ZMT1 411 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 SLC16A13Q7RTY0 426 aa13.64□□□□□ -0.23
TRAF3-202ENST00000351691 TMPRSS9Q7Z410 1059 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms