RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 VN1R2Q8NFZ6 395 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 FIBINQ8TAL6 211 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 PHOSPHO2Q8TCD6 241 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 SNX33Q8WV41 574 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 BPIFA2Q96DR5 249 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 ZNF285Q96NJ3 590 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 CNTNAP3BQ96NU0 1288 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 NRIP2Q9BQI9 281 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 RSRP1Q9BUV0 290 aa13.02□□□□□ -0.32
RLIM-202ENST00000349225 RIIAD1A6NNX1 92 aa13.02□□□□□ -0.33
RLIM-202ENST00000349225 OR2B11Q5JQS5 317 aa13.02□□□□□ -0.33
RLIM-202ENST00000349225 LIN54Q6MZP7 749 aa13.02□□□□□ -0.33
RLIM-202ENST00000349225 DMRTC2Q8IXT2 367 aaPredicted RBP13.02□□□□□ -0.33
RLIM-202ENST00000349225 SLC35F2Q8IXU6 374 aa13.02□□□□□ -0.33
RLIM-202ENST00000349225 NUBPLQ8TB37 319 aa13.02□□□□□ -0.33
RLIM-202ENST00000349225 ZPLD1Q8TCW7 415 aa13.02□□□□□ -0.33
RLIM-202ENST00000349225 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
RLIM-202ENST00000349225 ALX4Q9H161 411 aaPredicted RBP13.02□□□□□ -0.33
RLIM-202ENST00000349225 ZNF346Q9UL40 294 aaKnown RBP13.02□□□□□ -0.33
RLIM-202ENST00000349225 SNRNP200O75643 2136 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 A0A1B0GTH9 108 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 TSPAN11A1L157 253 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 NARSO43776 548 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 IGHV2-5P01817 119 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 ADH6P28332 368 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 SDHAP31040 664 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 EEF1A1P68104 462 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 DHRS2Q13268 280 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 SMCO1Q147U7 214 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 C9orf64Q5T6V5 341 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 GALNT16Q8N428 558 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 CDS1Q92903 461 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 TIFAQ96CG3 184 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 MAP3K3Q99759 626 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 RSPH9Q9H1X1 276 aaPredicted RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR2AG1Q9H205 316 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 PPIHO43447 177 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 LY86O95711 162 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 CD74P04233 296 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 TIMP2P16035 220 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 HIST1H1CP16403 213 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 DDX6P26196 483 aaKnown RBP eCLIP13.01□□□□□ -0.33
RLIM-202ENST00000349225 SOX2P48431 317 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 ELAVL1Q15717 326 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 DPPA4Q7L190 304 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 TRAPPC5Q8IUR0 188 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 GTPBP8Q8N3Z3 284 aaPredicted RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR52E2Q8NGJ4 325 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR1J4Q8NGS1 313 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR4K13Q8NH42 304 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR4C6Q8NH72 309 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 SLC2A12Q8TD20 617 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 SFXN5Q8TD22 340 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 C2orf15Q8WU43 125 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 C14orf79Q96F83 325 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 Q96M85 177 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 SELENOIQ9C0D9 397 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 SLITRK2Q9H156 845 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 KLHL28Q9NXS3 571 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 KCNE5Q9UJ90 142 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 GGT3PA6NGU5 568 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 ST8SIA5O15466 376 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR1F1O43749 312 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 ALOX12BO75342 701 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 CTAG2O75638 210 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 CTSLP07711 333 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 NGFRP08138 427 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR2T7P0C7T2 308 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 AKAIN1P0CW23 69 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 ZNF3P17036 446 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 AGAP20933 346 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 AVPR2P30518 371 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 NTSP30990 170 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 FAUP35544 74 aaKnown RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR1Q1Q15612 314 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 ATPAF1Q5TC12 328 aaPredicted RBP13.01□□□□□ -0.33
RLIM-202ENST00000349225 ZNF425Q6IV72 752 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 TMPRSS12Q86WS5 348 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR10R2Q8NGX6 335 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 OR2T27Q8NH04 317 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 RAD51AP1Q96B01 352 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 ZNF281Q9Y2X9 895 aa13.01□□□□□ -0.33
RLIM-202ENST00000349225 SCN5AQ14524 2016 aa13□□□□□ -0.33
RLIM-202ENST00000349225 SCN3AQ9NY46 2000 aa13□□□□□ -0.33
RLIM-202ENST00000349225 TRAPPC13A5PLN9 417 aa13□□□□□ -0.33
RLIM-202ENST00000349225 M0QYG6 137 aa13□□□□□ -0.33
RLIM-202ENST00000349225 LEFTY1O75610 366 aa13□□□□□ -0.33
RLIM-202ENST00000349225 PMS2P2O95744 297 aa13□□□□□ -0.33
RLIM-202ENST00000349225 RPN2P04844 631 aa13□□□□□ -0.33
RLIM-202ENST00000349225 CD1AP06126 327 aa13□□□□□ -0.33
RLIM-202ENST00000349225 CSF1P09603 554 aa13□□□□□ -0.33
RLIM-202ENST00000349225 ILF3Q12906 894 aaKnown RBP eCLIP13□□□□□ -0.33
RLIM-202ENST00000349225 TMPRSS11FQ6ZWK6 438 aa13□□□□□ -0.33
RLIM-202ENST00000349225 C17orf64Q86WR6 236 aa13□□□□□ -0.33
RLIM-202ENST00000349225 PCSK9Q8NBP7 692 aaKnown RBP13□□□□□ -0.33
RLIM-202ENST00000349225 TMED6Q8WW62 240 aa13□□□□□ -0.33
RLIM-202ENST00000349225 ASB13Q8WXK3 278 aa13□□□□□ -0.33
RLIM-202ENST00000349225 PIK3IP1Q96FE7 263 aa13□□□□□ -0.33
RLIM-202ENST00000349225 TMEM27Q9HBJ8 222 aa13□□□□□ -0.33
RLIM-202ENST00000349225 METTL1Q9UBP6 276 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms