RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ELOA3BQ3SY89 546 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 MANEAQ5SRI9 462 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 YOD1Q5VVQ6 348 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 TMPRSS12Q86WS5 348 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 ELOA3Q8NG57 546 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 ASB12Q8WXK4 309 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 KTI12Q96EK9 354 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 NPDC1Q9NQX5 325 aaPredicted RBP16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 PRTFDC1Q9NRG1 225 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 IKZF2Q9UKS7 526 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 NPTNQ9Y639 398 aa16.47■□□□□ 0.23
PTP4A3-202ENST00000349124 MEIS3P1A6NDR6 274 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 EFCAB7A8K855 629 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 A8MUA0 341 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 SIX6O95475 246 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 TNFP01375 233 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 UBE2MP61081 183 aaKnown RBP16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 MAMSTRQ6ZN01 415 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 LRRC69Q6ZNQ3 347 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 FAM122BQ7Z309 247 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 JAZF1Q86VZ6 243 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 GLB1L2Q8IW92 636 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 OR6V1Q8N148 313 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 ZSCAN1Q8NBB4 408 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 OR5AK2Q8NH90 309 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 PHOSPHO1Q8TCT1 267 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 PPP1R14AQ96A00 147 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 AMELYQ99218 206 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 RTN4RQ9BZR6 473 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 TAS2R10Q9NYW0 307 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 SDK1Q7Z5N4 2213 aa16.46■□□□□ 0.23
PTP4A3-202ENST00000349124 B4DGG1 531 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 CTNSO60931 367 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 CXCL2P19875 107 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 ITPKBP27987 946 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 GRK6P43250 576 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 EFNB2P52799 333 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 EIF2B5Q13144 721 aaKnown RBP16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 CBFBQ13951 182 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 C1QL3Q5VWW1 255 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 BAIAP2L2Q6UXY1 529 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 MED25Q71SY5 747 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 CHMP1BQ7LBR1 199 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 DPY19L4Q7Z388 723 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 DND1Q8IYX4 353 aaKnown RBP16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 RPS4Y2Q8TD47 263 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 ATOH1Q92858 354 aaPredicted RBP16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 MSANTD3Q96H12 275 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 OR1F2PQ96R84 312 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 PLEKHA1Q9HB21 404 aa16.46■□□□□ 0.22
PTP4A3-202ENST00000349124 BRWD1Q9NSI6 2320 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 PDCD5O14737 125 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 PPM1BO75688 479 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 AKR7A3O95154 331 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 RNH1P13489 461 aaKnown RBP16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 POU3F2P20265 443 aaPredicted RBP16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 AP2S1P53680 142 aaPredicted RBP16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 TAS2R20P59543 309 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 ALKBH1Q13686 389 aaKnown RBP16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 CSRP2Q16527 193 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 ZNF74Q16587 644 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 C2orf68Q2NKX9 166 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 KLHL26Q53HC5 615 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 ALG10Q5BKT4 473 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 SLC35D3Q5M8T2 416 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 FBXO46Q6PJ61 603 aaPredicted RBP16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 OOSP2Q86WS3 158 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 PRR22Q8IZ63 422 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 OR4D10Q8NGI6 311 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 LPAR4Q99677 370 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 MAP3K3Q99759 626 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 TCRBV21S2A2A0A5A6 115 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 ANKRD20A5PA0PJZ0 165 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 SHOXO15266 292 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 CD1AP06126 327 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 AKT2P31751 481 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 NUDT1P36639 197 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 MAZP56270 477 aaKnown RBP16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 GRM7Q14831 915 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 FAM69AQ5T7M9 428 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 OR5M10Q6IEU7 315 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 EXD3Q8N9H8 876 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 LRRC75AQ8NAA5 344 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 THEM6Q8WUY1 208 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 HAVCR1Q96D42 359 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 G6PC3Q9BUM1 346 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 CFAP54Q96N23 3096 aa16.45■□□□□ 0.22
PTP4A3-202ENST00000349124 M0R233 179 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 ITGA10O75578 1167 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 TGM6O95932 706 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 CD14P08571 375 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 ART1P52961 327 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 GUCA2AQ02747 115 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 HYAL1Q12794 435 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 Q499Y3 187 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 SFRP5Q5T4F7 317 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 BIVMQ86UB2 503 aa16.44■□□□□ 0.22
PTP4A3-202ENST00000349124 LRRTM1Q86UE6 522 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms