RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 TAB1Q15750 504 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 EEF1A1P5Q5VTE0 462 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC6A19Q695T7 634 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 CELF2-AS1Q8N7Q2 184 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 TMEM105Q8N8V8 129 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 HPS1Q92902 700 aa18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 AKIRIN1Q9H9L7 192 aaPredicted RBP18.42■□□□□ 0.54
CHRNA3-202ENST00000348639 PRR32B1ATL7 298 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 D6RAR5 112 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 C11orf98E9PRG8 122 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 DXOO77932 396 aaKnown RBP18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 UCHL1P09936 223 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 SUMO3P55854 103 aaPredicted RBP18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 IL18Q14116 193 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 P2RY14Q15391 338 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 MRPL14Q6P1L8 145 aaKnown RBP18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 SPATC1Q76KD6 591 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 CDC20BQ86Y33 519 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 Q8N402 240 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 IL17RDQ8NFM7 739 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 RNF138Q8WVD3 245 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 ST8SIA1Q92185 356 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 PCNX3Q9H6A9 2034 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 C19orf25Q9UFG5 118 aaPredicted RBP18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 RASD1Q9Y272 281 aa18.41■□□□□ 0.54
CHRNA3-202ENST00000348639 FAM25AB3EWG3 89 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 FAM25CB3EWG5 89 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 FAM25GB3EWG6 89 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 ARHGEF9O43307 516 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 OR2T1O43869 369 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 HLA-DQB1P01920 261 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 TACSTD2P09758 323 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC2A2P11168 524 aaPredicted RBP18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 PRKCAP17252 672 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 ELK1P19419 428 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 RAB3BP20337 219 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 DUSP3P51452 185 aaPredicted RBP18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 MADCAM1Q13477 382 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 FAM69BQ5VUD6 431 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 OR5M10Q6IEU7 315 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC23A3Q6PIS1 610 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 LRRC28Q86X40 367 aaPredicted RBP18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 PHYHIPQ92561 330 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 TTC9Q92623 222 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 MNTQ99583 582 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 PDCD1LG2Q9BQ51 273 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 MFRPQ9BY79 579 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 SLC22A4Q9H015 551 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 SYT4Q9H2B2 425 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 MALT1Q9UDY8 824 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 C2orf72A6NCS6 295 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 XKRYO14609 159 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 AHSA1O95433 338 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 RPL27P61353 136 aaKnown RBP18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 UNQ9370/PRO34162Q6UXP9 181 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 TRILQ7L0X0 811 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 CHAC2Q8WUX2 184 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 RELTQ969Z4 430 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 RNF166Q96A37 237 aaPredicted RBP18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 ADAD1Q96M93 576 aaKnown RBP18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 NEDD4LQ96PU5 975 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 SNX18Q96RF0 628 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 OR11A1Q9GZK7 315 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 CYSLTR2Q9NS75 346 aa18.4■□□□□ 0.54
CHRNA3-202ENST00000348639 LINC00854A0A1B0GVQ3 168 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 PSMD9O00233 223 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 NTN3O00634 580 aaPredicted RBP18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 TRIM3O75382 744 aaPredicted RBP18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 ZFAND5O76080 213 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 SYPP08247 313 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 AHCYP23526 432 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 ACKR1Q16570 336 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 PM20D2Q8IYS1 436 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 OR6S1Q8NH40 331 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 ZNF519Q8TB69 540 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 HAVCR2Q8TDQ0 301 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 GALNT9Q9HCQ5 603 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 KLHDC2Q9Y2U9 406 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 EXPH5Q8NEV8 1989 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 PLPP3O14495 311 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 DLX5P56178 289 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 SLC25A35Q3KQZ1 300 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 FAM199XQ6PEV8 388 aaPredicted RBP18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 FAM220AQ7Z4H9 259 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 OR14A2Q96R54 314 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 C11orf54Q9H0W9 315 aaPredicted RBP18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 TXNIPQ9H3M7 391 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 ZCCHC4Q9H5U6 513 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 WDR76Q9H967 626 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 MRPL39Q9NYK5 338 aaKnown RBP18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 MYOTQ9UBF9 498 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 EXTL2Q9UBQ6 330 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 ZNF281Q9Y2X9 895 aa18.39■□□□□ 0.53
CHRNA3-202ENST00000348639 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 A0A1W2PPK0 400 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 TVP23AA6NH52 213 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 NOTOA8MTQ0 251 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 B4DXG7 233 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 FTCDNL1E5RQL4 147 aa18.38■□□□□ 0.53
CHRNA3-202ENST00000348639 OR6A2O95222 327 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms