RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 C3orf38Q5JPI3 329 aa10.31□□□□□ -0.76
SMARCE1-202ENST00000348513 TMEM71Q6P5X7 295 aa10.31□□□□□ -0.76
SMARCE1-202ENST00000348513 PACRGQ96M98 296 aaPredicted RBP10.31□□□□□ -0.76
SMARCE1-202ENST00000348513 CNN2Q99439 309 aaKnown RBP10.31□□□□□ -0.76
SMARCE1-202ENST00000348513 A0A0U1RQK1 487 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 MGMTP16455 207 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 ETV4P43268 484 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 RIDAP52758 137 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 NR0B2Q15466 257 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 RGNQ15493 299 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 ABHD12BQ7Z5M8 362 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 C11orf42Q8N5U0 333 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 OR9Q2Q8NGE9 314 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 TRMT2BQ96GJ1 504 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 DMRT3Q9NQL9 472 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 GPR173Q9NS66 373 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 CCL26Q9Y258 94 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 PTRH2Q9Y3E5 179 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 PRSS38A1L453 326 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 FZD7O75084 574 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 CTAG1AP78358 180 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 HOXC5Q00444 222 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 TLE1Q04724 770 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 RAB31Q13636 194 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 PAGE3Q5JUK9 113 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 TRILQ7L0X0 811 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 OR2T4Q8NH00 348 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 DOK1Q99704 481 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 SCML1Q9UN30 329 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 A0A0J9YY10 115 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 TSPAN11A1L157 253 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 DRGXA6NNA5 263 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 ZBTB42B2RXF5 422 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 CCSO14618 274 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 RAD51DO75771 328 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 MMP2P08253 660 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 POU3F3P20264 500 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 DCTP40126 519 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 FOLR3P41439 243 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 PTGFRP43088 359 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 CXCL12P48061 93 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 SMAD2Q15796 467 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 ABHD17BQ5VST6 288 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 OR2A2Q6IF42 318 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 TOMM20LQ6UXN7 152 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 LFNGQ8NES3 379 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 SLC24A4Q8NFF2 622 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 DTD2Q96FN9 168 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 OR5B2Q96R09 309 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF586Q9NXT0 402 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 CHRNA9Q9UGM1 479 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 RNF24Q9Y225 148 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 LSM5Q9Y4Y9 91 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 APEX1P27695 318 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 CDK5Q00535 292 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 RBMS2Q15434 407 aaKnown RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 ZNF791Q3KP31 576 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 KIAA0907Q7Z7F0 614 aaPredicted RBP10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 NAXDQ8IW45 347 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 OR4D6Q8NGJ1 314 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 GPR119Q8TDV5 335 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 SAMD8Q96LT4 415 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 GSTO2Q9H4Y5 243 aa10.3□□□□□ -0.76
SMARCE1-202ENST00000348513 CXorf65A6NEN9 183 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 DBX1A6NMT0 343 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 SLC26A5P58743 744 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 TAS2R20P59543 309 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 ADARB1P78563 741 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 EXOSC7Q15024 291 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 SLC5A8Q8N695 610 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 SPRYD4Q8WW59 207 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 RTP4Q96DX8 246 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 RBM24Q9BX46 236 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 MTHFD2LQ9H903 347 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 FAM155AB1AL88 458 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 PPP5D1E7EU14 171 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 AQP8O94778 261 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 UBE2NP61088 152 aaKnown RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 MALLQ13021 153 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 PIN1Q13526 163 aaPredicted RBP10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 RCAN2Q14206 197 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 NDUFAF7Q7L592 441 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 TEX26Q8N6G2 289 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 YIPF6Q96EC8 236 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 MAP3K3Q99759 626 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 TRAPPC4Q9Y296 219 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 NPFFR2Q9Y5X5 522 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 CSNK1G3Q9Y6M4 447 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 CDC14CA4D256 554 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 PPP6CO00743 305 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 FBXO24O75426 580 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 SGSHP51688 502 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 FJX1Q86VR8 437 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 THNSL2Q86YJ6 484 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 CYB561A3Q8NBI2 242 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 CXorf58Q96LI9 332 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 TMEM43Q9BTV4 400 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 RCE1Q9Y256 329 aa10.29□□□□□ -0.76
SMARCE1-202ENST00000348513 TMEM218A2RU14 115 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms