RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 TAS2R20P59543 309 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 HES5Q5TA89 166 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 SLC6A19Q695T7 634 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 MTFR2Q6P444 385 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 NHLRC1Q6VVB1 395 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 C17orf107Q6ZR85 190 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 Q6ZS52 159 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 Q6ZSR6 202 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 SLC35F3Q8IY50 421 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 OR52E1Q8NGJ3 308 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 OR14A16Q8NHC5 309 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 ST8SIA2Q92186 375 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 MS4A6EQ96DS6 147 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF681Q96N22 645 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 DERL3Q96Q80 235 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF559Q9BR84 538 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 MYOZ1Q9NP98 299 aaPredicted RBP14.52□□□□□ -0.09
HMGA1-202ENST00000347617 EQTNQ9NQ60 294 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 BIN3Q9NQY0 253 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 KLK11Q9UBX7 282 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 MTFP1Q9UDX5 166 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 TBC1D29Q9UFV1 150 aa14.52□□□□□ -0.09
HMGA1-202ENST00000347617 A6NCN8 305 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 PYCARD-AS1I3L0S3 204 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 LCMT2O60294 686 aaKnown RBP14.51□□□□□ -0.09
HMGA1-202ENST00000347617 ZIC2O95409 532 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-202ENST00000347617 TNFP01375 233 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 APOC1P02654 83 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 VSIG10L2P0DP72 767 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 SIM1P81133 766 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-202ENST00000347617 DEFA5Q01523 94 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 GPR68Q15743 365 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 LPCAT3Q6P1A2 487 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 ARMC10Q8N2F6 343 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF619Q8N2I2 560 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 TSTD1Q8NFU3 115 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 OR10K1Q8NGX5 313 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 PEX11GQ96HA9 241 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 C6orf106Q9H6K1 298 aaPredicted RBP14.51□□□□□ -0.09
HMGA1-202ENST00000347617 PRDM9Q9NQV7 894 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 TAS2R3Q9NYW6 316 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 EPHA6Q9UF33 1036 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 MLXQ9UH92 298 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 ATG4BQ9Y4P1 393 aa14.51□□□□□ -0.09
HMGA1-202ENST00000347617 ACOD1A6NK06 481 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 H0Y8X5 98 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 GOSR2O14653 212 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 ERI3O43414 337 aaKnown RBP14.5□□□□□ -0.09
HMGA1-202ENST00000347617 FCMRO60667 390 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR2F2O95006 317 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 NOS3P29474 1203 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 STARP49675 285 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 DUSP2Q05923 314 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 SRSF4Q08170 494 aaKnown RBP14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR2F1Q13607 317 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 ALG11Q2TAA5 492 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 LIN54Q6MZP7 749 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 ATRAIDQ6UW56 229 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 THSD4Q6ZMP0 1018 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 SSX6Q7RTT6 188 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR5M1Q8NGP8 315 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR13C2Q8NGS9 318 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR9A2Q8NGT5 310 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 PFN4Q8NHR9 129 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 GPBAR1Q8TDU6 330 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 TNFAIP8L1Q8WVP5 186 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 THRSPQ92748 146 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 SLC22A18Q96BI1 424 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR1F2PQ96R84 312 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR5V1Q9UGF6 321 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 SZT2Q5T011 3432 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 A0A0G2JN53 185 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 A0A1W2PPC4 97 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 A0A1W2PPK0 400 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 GLOD5A6NK44 160 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 OR52A4PA6NMU1 304 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 XRCC3O43542 346 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF432O94892 652 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 PPP1R3DO95685 299 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 PMS2P2O95744 297 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 AK1P00568 194 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 IFNA4P05014 189 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 CNR1P21554 472 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 CDK2P24941 298 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 DCTDP32321 178 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 H2BFSP57053 126 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 MICBQ29980 383 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 SYT9Q86SS6 491 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 PAQR7Q86WK9 346 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 SVBPQ8N300 66 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 KCNRGQ8N5I3 272 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 CDS1Q92903 461 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 TSACCQ96A04 125 aaPredicted RBP14.5□□□□□ -0.09
HMGA1-202ENST00000347617 C10orf90Q96M02 699 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 GFI1Q99684 422 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 USB1Q9BQ65 265 aaKnown RBP14.5□□□□□ -0.09
HMGA1-202ENST00000347617 ZNF350Q9GZX5 532 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 AICDAQ9GZX7 198 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 ENKD1Q9H0I2 346 aa14.5□□□□□ -0.09
HMGA1-202ENST00000347617 C1orf198Q9H425 327 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms