RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SDHAP31040 664 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 ILF3Q12906 894 aaKnown RBP eCLIP14.04□□□□□ -0.16
LMNA-201ENST00000347559 ZNF547Q8IVP9 402 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 SYS1Q8N2H4 156 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 OR4A4PQ8NGN8 299 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 SFXN5Q8TD22 340 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 PHYHIPLQ96FC7 376 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 RSRP1Q9BUV0 290 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 ACTRT3Q9BYD9 372 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 AICDAQ9GZX7 198 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 TAS2R8Q9NYW2 309 aa14.04□□□□□ -0.16
LMNA-201ENST00000347559 CARHSP1Q9Y2V2 147 aaKnown RBP14.04□□□□□ -0.16
LMNA-201ENST00000347559 EEF1E1-BLOC1S5C9J1V9 151 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 C4orf51C9J302 202 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 GRM6O15303 877 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 PMS2P2O95744 297 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 AMY2AP04746 511 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 GPR1P46091 355 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 ECH1Q13011 328 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 PON3Q15166 354 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 TGIF1Q15583 401 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 GFOD2Q3B7J2 385 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 GXYLT1Q4G148 440 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 STOML3Q8TAV4 291 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 C15orf40Q8WUR7 153 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 FAM83CQ9BQN1 747 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 MFRPQ9BY79 579 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 MTHFD2LQ9H903 347 aaPredicted RBP14.03□□□□□ -0.16
LMNA-201ENST00000347559 CAPN10Q9HC96 672 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 STEAP1Q9UHE8 339 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 ZNF346Q9UL40 294 aaKnown RBP14.03□□□□□ -0.16
LMNA-201ENST00000347559 SLC45A1Q9Y2W3 748 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 ADAM18Q9Y3Q7 739 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 IER3IP1Q9Y5U9 82 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 A0A0B4J2A0 478 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 XRCC3O43542 346 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 GPRIN2O60269 458 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 RAB3DO95716 219 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 HLA-AP01891 365 aaKnown RBP14.03□□□□□ -0.16
LMNA-201ENST00000347559 ABCD3P28288 659 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 PRSS3P35030 304 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 PRKXP51817 358 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 MRPL2Q5T653 305 aaKnown RBP14.03□□□□□ -0.16
LMNA-201ENST00000347559 PRAMEF8Q5VWM4 474 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 PRAMEF7Q5VXH5 474 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 DCUN1D3Q8IWE4 304 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 ACOT4Q8N9L9 421 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 NUBPLQ8TB37 319 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 Q96M85 177 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 XKR8Q9H6D3 395 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 SHPKQ9UHJ6 478 aa14.03□□□□□ -0.16
LMNA-201ENST00000347559 PCYT1BQ9Y5K3 369 aaPredicted RBP14.03□□□□□ -0.16
LMNA-201ENST00000347559 MDC1Q14676 2089 aaKnown RBP14.02□□□□□ -0.16
LMNA-201ENST00000347559 TBC1D3EA0A087X179 549 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 TSPAN11A1L157 253 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 GGT3PA6NGU5 568 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 COLCA2A8K830 154 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 OR8G3PP0DMU2 310 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 ZNF14P17017 642 aaPredicted RBP14.02□□□□□ -0.16
LMNA-201ENST00000347559 EPHB3P54753 998 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 DHRS2Q13268 280 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 RHOUQ7L0Q8 258 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 JAZF1Q86VZ6 243 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 MISPQ8IVT2 679 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 NLGN2Q8NFZ4 835 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 OR5M8Q8NGP6 311 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 ZNF461Q8TAF7 563 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 SLC2A12Q8TD20 617 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 SELENOIQ9C0D9 397 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 PRSS16Q9NQE7 514 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 DZANK1Q9NVP4 752 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 HAO2Q9NYQ3 351 aa14.02□□□□□ -0.16
LMNA-201ENST00000347559 DENND4CQ5VZ89 1909 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 GXYLT2A0PJZ3 443 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 C5orf52A6NGY3 159 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 PEX12O00623 359 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 LY86O95711 162 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 LAG3P18627 525 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 GABRR2P28476 465 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 RPL4P36578 427 aaKnown RBP14.02□□□□□ -0.17
LMNA-201ENST00000347559 REEP5Q00765 189 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 AIMP2Q13155 320 aaKnown RBP14.02□□□□□ -0.17
LMNA-201ENST00000347559 NKAPLQ5M9Q1 402 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 FIGNL1Q6PIW4 674 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 KCTD9Q7L273 389 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 TMEM25Q86YD3 366 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 OR4N5Q8IXE1 308 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 OR2L13Q8N349 312 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 CASTOR1Q8WTX7 329 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 CLCC1Q96S66 551 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 MYADMQ96S97 322 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 NMNAT3Q96T66 252 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 MICU1Q9BPX6 476 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 SFXN1Q9H9B4 322 aa14.02□□□□□ -0.17
LMNA-201ENST00000347559 ZMAT3Q9HA38 289 aaKnown RBP14.02□□□□□ -0.17
LMNA-201ENST00000347559 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.17
LMNA-201ENST00000347559 TRAV8-7A0A075B6U6 113 aa14.01□□□□□ -0.17
LMNA-201ENST00000347559 PMS2P1A4D2B8 440 aa14.01□□□□□ -0.17
LMNA-201ENST00000347559 RAD1O60671 282 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms