RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 ELOA3DA6NLF2 546 aaPredicted RBP11.66□□□□□ -0.54
CLK3-201ENST00000345005 SURF4O15260 269 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 OIP5O43482 229 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 FADS1O60427 444 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 PTP4A3O75365 173 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 RGS9O75916 674 aaPredicted RBP11.66□□□□□ -0.54
CLK3-201ENST00000345005 IGHA1P01876 353 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 STOMP27105 288 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 HTR1FP30939 366 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 CRYZQ08257 329 aaKnown RBP11.66□□□□□ -0.54
CLK3-201ENST00000345005 ELOA3BQ3SY89 546 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 CCDC157Q569K6 752 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 OR2G6Q5TZ20 316 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 CD276Q5ZPR3 534 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 HBMQ6B0K9 141 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 SMARCD3Q6STE5 483 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 CBLN3Q6UW01 205 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 FAM198BQ6UWH4 519 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 PAMR1Q6UXH9 720 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 OAFQ86UD1 273 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 MARCH3Q86UD3 253 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 SUMF1Q8NBK3 374 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 ELOA3Q8NG57 546 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 RFT1Q96AA3 541 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 C8orf44Q96CB5 159 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 GPR137Q96N19 417 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 MESP1Q9BRJ9 268 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 SIGLEC7Q9Y286 467 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 PTRH2Q9Y3E5 179 aaKnown RBP11.66□□□□□ -0.54
CLK3-201ENST00000345005 NUBP2Q9Y5Y2 271 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 B3GALT1Q9Y5Z6 326 aa11.66□□□□□ -0.54
CLK3-201ENST00000345005 C7orf66A4D0T2 115 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 PCNX2A6NKB5 2137 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 HCRTR2O43614 444 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 IGF2P01344 180 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 EVI2BP34910 448 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 PTGS2P35354 604 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 TAS2R43P59537 309 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 PITPNAQ00169 270 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 ZNF117Q03924 483 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 RTL4Q6ZR62 310 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 RAB11FIP2Q7L804 512 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 BCDIN3DQ7Z5W3 292 aaKnown RBP11.65□□□□□ -0.54
CLK3-201ENST00000345005 MISPQ8IVT2 679 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 LNX2Q8N448 690 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 OR13C2Q8NGS9 318 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 ZNF563Q8TA94 476 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 LHFPL5Q8TAF8 219 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 PMEPA1Q969W9 287 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 UPRTQ96BW1 309 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 SGTBQ96EQ0 304 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 TAAR9Q96RI9 348 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 DPAGT1Q9H3H5 408 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 LIN7BQ9HAP6 207 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 ZMAT5Q9UDW3 170 aaKnown RBP11.65□□□□□ -0.54
CLK3-201ENST00000345005 BAIAP2Q9UQB8 552 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 AUP1Q9Y679 476 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 CACNA1HO95180 2353 aa11.65□□□□□ -0.54
CLK3-201ENST00000345005 A0A0G2JMP0 313 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 TUBAL3A6NHL2 446 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 IFNA7P01567 189 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 IGHEP01854 428 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 ANXA3P12429 323 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 FUT1P19526 365 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 PGCP20142 388 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 ATP6V1E1P36543 226 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 PITPNBP48739 271 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 INSM1Q01101 510 aaPredicted RBP11.65□□□□□ -0.55
CLK3-201ENST00000345005 SPEM2Q0P670 501 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 ISXQ2M1V0 245 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 AADACL4Q5VUY2 407 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 LAMTOR1Q6IAA8 161 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 UTS2BQ765I0 119 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 NUP54Q7Z3B4 507 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 KCTD20Q7Z5Y7 419 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.55
CLK3-201ENST00000345005 OR2Y1Q8NGV0 311 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 OR5W2Q8NH69 310 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.55
CLK3-201ENST00000345005 THAP3Q8WTV1 239 aaPredicted RBP11.65□□□□□ -0.55
CLK3-201ENST00000345005 LIN37Q96GY3 246 aaPredicted RBP11.65□□□□□ -0.55
CLK3-201ENST00000345005 THAP7Q9BT49 309 aaPredicted RBP11.65□□□□□ -0.55
CLK3-201ENST00000345005 DDA1Q9BW61 102 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 DEFB126Q9BYW3 111 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 C12orf4Q9NQ89 552 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 EXTL2Q9UBQ6 330 aa11.65□□□□□ -0.55
CLK3-201ENST00000345005 ELF5Q9UKW6 265 aaPredicted RBP11.65□□□□□ -0.55
CLK3-201ENST00000345005 BHLHE40O14503 412 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 GNB5O14775 395 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 KLF7O75840 302 aaPredicted RBP11.64□□□□□ -0.55
CLK3-201ENST00000345005 SLC22A5O76082 557 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 STK17BO94768 372 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 CH25HO95992 272 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 UMODP07911 640 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 CELP19835 753 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 NPR2P20594 1047 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 AHCYP23526 432 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 ITPKBP27987 946 aa11.64□□□□□ -0.55
CLK3-201ENST00000345005 P2RX1P51575 399 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms