RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 ALDH3A1P30838 453 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 MAD2L1Q13257 205 aaPredicted RBP14.37□□□□□ -0.11
TRA2B-202ENST00000342294 MAPK11Q15759 364 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 ALKBH6Q3KRA9 238 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 GLIPR1L2Q4G1C9 344 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 ANXA8L1Q5VT79 327 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 RNF130Q86XS8 419 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 SLC25A36Q96CQ1 311 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 DPY30Q9C005 99 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 HINT3Q9NQE9 182 aaKnown RBP14.37□□□□□ -0.11
TRA2B-202ENST00000342294 NOP53Q9NZM5 478 aaKnown RBP14.37□□□□□ -0.11
TRA2B-202ENST00000342294 ZNF69Q9UC07 566 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 SLC7A8Q9UHI5 535 aa14.37□□□□□ -0.11
TRA2B-202ENST00000342294 IGLV3-9A0A075B6K5 115 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 PPIAL4EA0A075B759 164 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 PPIAL4CA0A0B4J2A2 164 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 IGHV1-69-2A0A0G2JMI3 117 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 PPIAL4DF5H284 164 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 M0R3G1 203 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 CLPTM1O96005 669 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 PPIAL4FP0DN26 164 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 GCH1P30793 250 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 CHI3L1P36222 383 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-202ENST00000342294 GIPRP48546 466 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 PTDSS1P48651 473 aaKnown RBP14.36□□□□□ -0.11
TRA2B-202ENST00000342294 COPZ1P61923 177 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 GALK2Q01415 458 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 C1DQ13901 141 aaKnown RBP14.36□□□□□ -0.11
TRA2B-202ENST00000342294 CHI3L2Q15782 390 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 NKPD1Q17RQ9 610 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 WHAMMP3Q1A5X7 153 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 SMU1Q2TAY7 513 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 PCGF3Q3KNV8 242 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 ZNF836Q6ZNA1 936 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 VRK2Q86Y07 508 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 PEX5LQ8IYB4 626 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 C20orf196Q8IYI0 205 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 C17orf53Q8N3J3 647 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-202ENST00000342294 TAF15Q92804 592 aaKnown RBP eCLIP14.36□□□□□ -0.113e-6■□□□□ 8.6
TRA2B-202ENST00000342294 KTI12Q96EK9 354 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-202ENST00000342294 ZNF48Q96MX3 618 aaPredicted RBP14.36□□□□□ -0.11
TRA2B-202ENST00000342294 GPA33Q99795 319 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 GRPEL1Q9HAV7 217 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 TAAR3PQ9P1P4 343 aa14.36□□□□□ -0.11
TRA2B-202ENST00000342294 ARHGAP32A7KAX9 2087 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 CLDN34H7C241 214 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 FAM153BP0C7A2 387 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 RAD52P43351 418 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 RPS5P46782 204 aaKnown RBP14.35□□□□□ -0.11
TRA2B-202ENST00000342294 AQP5P55064 265 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 RAB1AP62820 205 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 TXNL4AP83876 142 aaKnown RBP14.35□□□□□ -0.11
TRA2B-202ENST00000342294 TEKQ02763 1124 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 MFSD13AQ14CX5 517 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 KLF17Q5JT82 389 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-202ENST00000342294 NHLRC1Q6VVB1 395 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 ZNF813Q6ZN06 617 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 RETREG3Q86VR2 466 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 ZNF584Q8IVC4 421 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 BCL6BQ8N143 479 aaPredicted RBP14.35□□□□□ -0.11
TRA2B-202ENST00000342294 C4orf33Q8N1A6 199 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 DEFB108BQ8NET1 73 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 VPS37AQ8NEZ2 397 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 MGARPQ8TDB4 240 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 POP5Q969H6 163 aaKnown RBP14.35□□□□□ -0.11
TRA2B-202ENST00000342294 TESCQ96BS2 214 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 LRR1Q96L50 414 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 TSPAN32Q96QS1 320 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 MECRQ9BV79 373 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 NUP50Q9UKX7 468 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 CHST2Q9Y4C5 530 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 CACNG2Q9Y698 323 aa14.35□□□□□ -0.11
TRA2B-202ENST00000342294 WNK1Q9H4A3 2382 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 CLDN25C9JDP6 229 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 AKAP8O43823 692 aaKnown RBP14.34□□□□□ -0.11
TRA2B-202ENST00000342294 NR2F1P10589 423 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 ZNF250P15622 560 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 MDKP21741 143 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-202ENST00000342294 LCN2P80188 198 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 BAMBIQ13145 260 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 RAB39AQ14964 217 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 LIN52Q52LA3 116 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 ATG16L1Q676U5 607 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 RGS7BPQ6MZT1 257 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-202ENST00000342294 TMEM154Q6P9G4 183 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 WDFY1Q8IWB7 410 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 CLIP4Q8N3C7 705 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 OR52P1PQ8NH57 321 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 CCDC115Q96NT0 180 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 PLEK2Q9NYT0 353 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 GPR160Q9UJ42 338 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 LEF1Q9UJU2 399 aaPredicted RBP14.34□□□□□ -0.11
TRA2B-202ENST00000342294 FBXL3Q9UKT7 428 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 MMP24Q9Y5R2 645 aa14.34□□□□□ -0.11
TRA2B-202ENST00000342294 M0R082 166 aa14.33□□□□□ -0.12
TRA2B-202ENST00000342294 AIM2O14862 343 aa14.33□□□□□ -0.12
TRA2B-202ENST00000342294 RAB36O95755 333 aa14.33□□□□□ -0.12
TRA2B-202ENST00000342294 SHBGP04278 402 aa14.33□□□□□ -0.12
TRA2B-202ENST00000342294 SERPINA5P05154 406 aa14.33□□□□□ -0.12
TRA2B-202ENST00000342294 B4GALT1P15291 398 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms