RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 ALKBH4Q9NXW9 302 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 USE1Q9NZ43 259 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 PPP4R1LQ9P1A2 415 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 CRNNQ9UBG3 495 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 DUSP13Q9UII6 198 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 FBXL2Q9UKC9 423 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 FAM215AQ9Y5M1 114 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ENPP4Q9Y6X5 453 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ANKRD11Q6UB99 2663 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 EP300Q09472 2414 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ARPC4-TTLL3A0A0A6YYG9 625 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 TRGV5A0A0B4J1U4 118 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 TRAPPC13A5PLN9 417 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 OR6C65A6NJZ3 312 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 LIPT2A6NK58 231 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 AQP7P3A6NL99 342 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ZNF716A6NP11 495 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 A8MUA0 341 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 H0YJX3 145 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 FFAR1O14842 300 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 CASQ2O14958 399 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 EIF1BO60739 113 aaKnown RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 KRT36O76013 467 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 VAMP5O95183 116 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 FESP07332 822 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 RFPL3SP0C7P2 107 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 FAHP16930 419 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ZNF24P17028 368 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 BMP7P18075 431 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 COX5AP20674 150 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ME2P23368 584 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SOAT1P35610 550 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 GSSP48637 474 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 NUDT2P50583 147 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SMSP52788 366 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SMIM11AP58511 58 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 CTXN1P60606 82 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 RAC3P60763 192 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ACTR3P61158 418 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 IRF3Q14653 427 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SLC10A1Q14973 349 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 RNPS1Q15287 305 aaKnown RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 IFI44LQ53G44 452 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ENTPD8Q5MY95 495 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SLC25A30Q5SVS4 291 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ZFP1Q6P2D0 407 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 FAHD1Q6P587 224 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 IL20RBQ6UXL0 311 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 MARCH3Q86UD3 253 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 LINC00346Q8IVM7 164 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 PARP8Q8N3A8 854 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 MARVELD2Q8N4S9 558 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ZNF540Q8NDQ6 660 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 OR10A6Q8NH74 314 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SNX33Q8WV41 574 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ASB5Q8WWX0 329 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 CPNE4Q96A23 557 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SLCO4A1Q96BD0 722 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 EFHD2Q96C19 240 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SLC47A1Q96FL8 570 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 AURKBQ96GD4 344 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 PPP1R36Q96LQ0 422 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ADAD1Q96M93 576 aaKnown RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 DACH2Q96NX9 599 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ZNF300Q96RE9 604 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 NR1H4Q96RI1 486 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 TIMP4Q99727 224 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 CITED2Q99967 270 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 KCTD14Q9BQ13 255 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 KLHL4Q9C0H6 718 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 DENND2DQ9H6A0 471 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 METTL7AQ9H8H3 244 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 MRPL15Q9P015 296 aaKnown RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 RABL2AQ9UBK7 228 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 ZNF629Q9UEG4 869 aaPredicted RBP3.11□□□□□ -1.91
CCDC66-202ENST00000341455 RASD1Q9Y272 281 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 SLC6A5Q9Y345 797 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 OR10H1Q9Y4A9 318 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 CEP295Q9C0D2 2601 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 FRYQ5TBA9 3013 aa3.11□□□□□ -1.91
CCDC66-202ENST00000341455 TRAV36DV7A0A075B6V5 113 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 TMEM72A0PK05 275 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 OR2M5A3KFT3 312 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 A8MVM7 634 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 J3KTA2 159 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 REM1O75628 298 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 CLDN14O95500 239 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 ANP32DO95626 131 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 LY86O95711 162 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 HPRP00739 348 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 CSTAP01040 98 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 RAP2AP10114 183 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 HK1P19367 917 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 ATP6V1B2P21281 511 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 IDUAP35475 653 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 CRATP43155 626 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 COMPP49747 757 aaPredicted RBP3.1□□□□□ -1.91
CCDC66-202ENST00000341455 HPCAP84074 193 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 EFNB1P98172 346 aa3.1□□□□□ -1.91
CCDC66-202ENST00000341455 RBPJQ06330 500 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms