RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 IL17RDQ8NFM7 739 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 KTI12Q96EK9 354 aaPredicted RBP13.5□□□□□ -0.25
LINC01116-202ENST00000339037 ITCHQ96J02 903 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 OXGR1Q96P68 337 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 RMND5AQ9H871 391 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 GPR35Q9HC97 309 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 THUMPD1Q9NXG2 353 aaKnown RBP13.5□□□□□ -0.25
LINC01116-202ENST00000339037 IFT52Q9Y366 437 aa13.5□□□□□ -0.25
LINC01116-202ENST00000339037 A0A0G2JPF8 293 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 TMEM129A0AVI4 362 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 HNRNPCL2B2RXH8 293 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 HNRNPCL3B7ZW38 293 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 AIM2O14862 343 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
LINC01116-202ENST00000339037 HNRNPCL1O60812 293 aaKnown RBP13.49□□□□□ -0.25
LINC01116-202ENST00000339037 SEC14L2O76054 403 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 ADRA2AP08913 450 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 HNRNPCL4P0DMR1 293 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 HOXB9P17482 250 aaPredicted RBP13.49□□□□□ -0.25
LINC01116-202ENST00000339037 HOXC5Q00444 222 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF311Q5JNZ3 666 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 KRT80Q6KB66 452 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 SLC2A7Q6PXP3 512 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 RINLQ6ZS11 566 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 MEX3DQ86XN8 651 aaKnown RBP13.49□□□□□ -0.25
LINC01116-202ENST00000339037 GTF2H4Q92759 462 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF837Q96EG3 531 aaPredicted RBP13.49□□□□□ -0.25
LINC01116-202ENST00000339037 PAIP1Q9H074 479 aaKnown RBP13.49□□□□□ -0.25
LINC01116-202ENST00000339037 TPK1Q9H3S4 243 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 USP22Q9UPT9 525 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 CMAHPQ9Y471 501 aa13.49□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF99A8MXY4 864 aaPredicted RBP13.48□□□□□ -0.25
LINC01116-202ENST00000339037 LYNX1G3V0Z9 82 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 M0R082 166 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 OR2T1O43869 369 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 IGFBP1P08833 259 aaPredicted RBP13.48□□□□□ -0.25
LINC01116-202ENST00000339037 LYNX1P0DP58 116 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 DVL1P1P54792 670 aaPredicted RBP13.48□□□□□ -0.25
LINC01116-202ENST00000339037 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
LINC01116-202ENST00000339037 FAM69AQ5T7M9 428 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 AGBL2Q5U5Z8 902 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 C6orf89Q6UWU4 347 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 TMEM123Q8N131 208 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF417Q8TAU3 575 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 SLC35B4Q969S0 331 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 C7orf26Q96N11 449 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 OR2M2Q96R28 347 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 ZNF587Q96SQ5 575 aaPredicted RBP13.48□□□□□ -0.25
LINC01116-202ENST00000339037 EBF4Q9BQW3 602 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 SLCO1B3Q9NPD5 702 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 RPS6KB2Q9UBS0 482 aa13.48□□□□□ -0.25
LINC01116-202ENST00000339037 B4DSR2 109 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 M0R233 179 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 M0R3G1 203 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 TRAF3IP2O43734 574 aaPredicted RBP13.47□□□□□ -0.25
LINC01116-202ENST00000339037 SYNGR3O43761 229 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 FZD7O75084 574 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 HLA-HP01893 362 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 NR4A1P22736 598 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 GRPRP30550 384 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 RELBQ01201 579 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 RGNQ15493 299 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 C5orf46Q6UWT4 87 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 H1FNTQ75WM6 255 aaPredicted RBP13.47□□□□□ -0.25
LINC01116-202ENST00000339037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.47□□□□□ -0.25
LINC01116-202ENST00000339037 SLC38A4Q969I6 547 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 MAL2Q969L2 176 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 TAAR8Q969N4 342 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 MRPL24Q96A35 216 aaKnown RBP13.47□□□□□ -0.25
LINC01116-202ENST00000339037 C12orf10Q9HB07 376 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 TCF7L2Q9NQB0 619 aa13.47□□□□□ -0.25
LINC01116-202ENST00000339037 LOC102725191A0A1B0GVB3 256 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 A6NJY4 79 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 CLIC1O00299 241 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 POLR3GO15318 223 aaPredicted RBP13.46□□□□□ -0.25
LINC01116-202ENST00000339037 CD79AP11912 226 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 MRPL19P49406 292 aaKnown RBP13.46□□□□□ -0.25
LINC01116-202ENST00000339037 EVX1P49640 407 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 IDH3AP50213 366 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 GSG1Q2KHT4 349 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 CARD17Q5XLA6 110 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 C12orf54Q6X4T0 127 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 GLCCI1Q86VQ1 547 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 FUNDC1Q8IVP5 155 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 UEVLDQ8IX04 471 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 MSRB3Q8IXL7 192 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 C10orf111Q8N326 155 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 RSPO3Q9BXY4 272 aaPredicted RBP13.46□□□□□ -0.25
LINC01116-202ENST00000339037 MRPL37Q9BZE1 423 aaKnown RBP13.46□□□□□ -0.25
LINC01116-202ENST00000339037 MS4A5Q9H3V2 200 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 BCL2L10Q9HD36 194 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 A4GALTQ9NPC4 353 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 B3GNT2Q9NY97 397 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 SLC25A37Q9NYZ2 338 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 SLAMF8Q9P0V8 285 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 REV1Q9UBZ9 1251 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 SPEF1Q9Y4P9 236 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 NOX1Q9Y5S8 564 aa13.46□□□□□ -0.25
LINC01116-202ENST00000339037 PKD1L1Q8TDX9 2849 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms