RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 YIF1BQ5BJH7 314 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CELF2-AS1Q8N7Q2 184 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NUDT9Q9BW91 350 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ULBP3Q9BZM4 244 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 OR2B2Q9GZK3 357 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 DISC1C4P0D8 188 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 RAB3DO95716 219 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 GPR50Q13585 617 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 AGAP7PQ5VUJ5 663 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 OR13C9Q8NGT0 318 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 OR4Q3Q8NH05 313 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 HYLS1Q96M11 299 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ACOXLQ9NUZ1 547 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 IGHV1OR21-1A0A087WYE8 117 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 GJE1A6NN92 205 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ICOSLGO75144 302 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 MT-ATP6P00846 226 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 IGHV4-34P06331 123 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CBX5P45973 191 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CTBP2P56545 445 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CST11Q9H112 138 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SIGLEC7Q9Y286 467 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 PSME4Q14997 1843 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ZDBF2Q9HCK1 2354 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CREBL2O60519 120 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 IL33O95760 270 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 LSSP48449 732 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 PSG6Q00889 435 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 KCTD9Q7L273 389 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SFXN2Q96NB2 322 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ZNF346Q9UL40 294 aaKnown RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SLC7A11Q9UPY5 501 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 OR6C76A6NM76 312 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 M0R233 179 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CLUP10909 449 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ACKR1Q16570 336 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 PRSS53Q2L4Q9 553 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM205Q6UW68 189 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 LDAHQ9H6V9 325 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CHRNA9Q9UGM1 479 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 PRICKLE3O43900 615 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CBX7O95931 251 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NXPH1P58417 271 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SYS1Q8N2H4 156 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SLC19A3Q9BZV2 496 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NOX4Q9NPH5 578 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 A0A087WUJ7 227 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NUDT21O43809 227 aaKnown RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NR4A2P43354 598 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SQSTM1Q13501 440 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CAMK2DQ13557 499 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CD300LDQ6UXZ3 194 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 GDPD3Q7L5L3 318 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 DEFB123Q8N688 67 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 LRFN5Q96NI6 719 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 C7orf50Q9BRJ6 194 aaKnown RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NRIP3Q9NQ35 241 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 MYEF2Q9P2K5 600 aaKnown RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SPTBN2O15020 2390 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 C13orf42A0A1B0GVH6 325 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 FFAR1O14842 300 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SMAD9O15198 467 aaKnown RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ICAM2P13598 275 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SDHAP31040 664 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ACTBP60709 375 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 RPL27P61353 136 aaKnown RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ACTG1P63261 375 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM176BQ3YBM2 270 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SLC16A9Q7RTY1 509 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 TMEM52Q8NDY8 209 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ELP5Q8TE02 316 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 LAT2Q9GZY6 243 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 AKIP1Q9NQ31 210 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 KLF15Q9UIH9 416 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 COA3Q9Y2R0 106 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ACOT7O00154 380 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CPEP16870 476 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 PTH2RP49190 550 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 RPL18Q07020 188 aaKnown RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 KCNJ8Q15842 424 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NKAPLQ5M9Q1 402 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 CCDC71Q8IV32 467 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 HOXB13Q92826 284 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SARGQ9BW04 601 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ULBP2Q9BZM5 246 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 C11orf54Q9H0W9 315 aaPredicted RBP5.76□□□□□ -1.49
PRKDC-202ENST00000338368 TNFSF14O43557 240 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 ZGLP1P0C6A0 271 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SLC2A5P22732 501 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 C6orf183Q5T699 404 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 HACD4Q5VWC8 232 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SLC25A24Q6NUK1 477 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 LYPD4Q6UWN0 246 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 SYT9Q86SS6 491 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 THAP6Q8TBB0 222 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 C1orf198Q9H425 327 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 NGBQ9NPG2 151 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 REV1Q9UBZ9 1251 aa5.76□□□□□ -1.49
PRKDC-202ENST00000338368 MEN1O00255 615 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms