RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TMEM43Q9BTV4 400 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 FOXQ1Q9C009 403 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 FLRT3Q9NZU0 649 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 KCND3Q9UK17 655 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 C19orf53Q9UNZ5 99 aaPredicted RBP7.54□□□□□ -1.2
HPS4-201ENST00000336873 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 ACACAQ13085 2346 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 TRPM7Q96QT4 1865 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 ZNF593O00488 134 aaPredicted RBP7.54□□□□□ -1.2
HPS4-201ENST00000336873 CDK2AP1O14519 115 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 GOSR2O14653 212 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 SIGLEC5O15389 551 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 AHSA1O95433 338 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 THY1P04216 161 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 AMY2AP04746 511 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 ZGLP1P0C6A0 271 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 SLC2A5P22732 501 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 MNX1P50219 401 aaPredicted RBP7.54□□□□□ -1.2
HPS4-201ENST00000336873 GPR143P51810 404 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 ART1P52961 327 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 TRA2BP62995 288 aaKnown RBP7.54□□□□□ -1.2
HPS4-201ENST00000336873 SIGLEC14Q08ET2 396 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 EOGTQ5NDL2 527 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 AADACL4Q5VUY2 407 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 GARNL3Q5VVW2 1013 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 GPR155Q7Z3F1 870 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 CMTM4Q8IZR5 234 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 SETD6Q8TBK2 473 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 CDCA3Q99618 268 aaPredicted RBP7.54□□□□□ -1.2
HPS4-201ENST00000336873 GTPBP2Q9BX10 602 aaKnown RBP7.54□□□□□ -1.2
HPS4-201ENST00000336873 TRPV4Q9HBA0 871 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 BCL2L10Q9HD36 194 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 CHMP1AQ9HD42 196 aaPredicted RBP7.54□□□□□ -1.2
HPS4-201ENST00000336873 FSCN3Q9NQT6 498 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 MED29Q9NX70 200 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 PRODH2Q9UF12 536 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 KCNN3Q9UGI6 736 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 COPS3Q9UNS2 423 aa7.54□□□□□ -1.2
HPS4-201ENST00000336873 HEATR5AQ86XA9 2040 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 EPOPA6NHQ4 379 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 NPIPA5E9PKD4 350 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 GMDSO60547 372 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 PIPP12273 146 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 ELOAQ14241 798 aaKnown RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 GALEQ14376 348 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 TOMM34Q15785 309 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 SGCAQ16586 387 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 SLC22A10Q63ZE4 541 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 OR51A4Q8NGJ6 313 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 ACOT12Q8WYK0 555 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 C3orf49Q96BT1 292 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 PELI1Q96FA3 418 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 FCRL1Q96LA6 429 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 HYLS1Q96M11 299 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 ZNF578Q96N58 590 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 PSD2Q9BQI7 771 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 ZNF471Q9BX82 626 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 ACTR6Q9GZN1 396 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.53□□□□□ -1.2
HPS4-201ENST00000336873 CMC2Q9NRP2 79 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 KCNG2Q9UJ96 466 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 NPIPA1Q9UND3 350 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 SLC17A4Q9Y2C5 497 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 A3GALT2U3KPV4 340 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 GALR3O60755 368 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 PRAMEF2O60811 474 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 MPZL1O95297 269 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 WNT1P04628 370 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 TMIGD3P0DMS9 266 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 ZNF28P17035 718 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 ETV6P41212 452 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 RPL35P42766 123 aaKnown RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 POU3F1Q03052 451 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 ARHGAP11BQ3KRB8 267 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 TSSK4Q6SA08 328 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 KLHL24Q6TFL4 600 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 NUP54Q7Z3B4 507 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 LILRB1Q8NHL6 650 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 SFXN5Q8TD22 340 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 FBLIM1Q8WUP2 373 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 KTI12Q96EK9 354 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 MAP6Q96JE9 813 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 G6PC3Q9BUM1 346 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 GPN1Q9HCN4 374 aaPredicted RBP7.53□□□□□ -1.2
HPS4-201ENST00000336873 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 GMEB2Q9UKD1 530 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 SERINC4A6NH21 518 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 SYT5O00445 386 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 ZNHIT1O43257 154 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 ZFPL1O95159 310 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 HCKP08631 526 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 GLULP15104 373 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 PI3P19957 117 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 RAD52P43351 418 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 TAS2R43P59537 309 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 PUDPQ08623 228 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 CDC20Q12834 499 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 FAM69AQ5T7M9 428 aa7.53□□□□□ -1.2
HPS4-201ENST00000336873 HEPHL1Q6MZM0 1159 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms