RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 CA5BP1Q8WTZ4 195 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 GABARAPL1Q9H0R8 117 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 PIGMQ9H3S5 423 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 PLSCR4Q9NRQ2 329 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 PARPBPQ9NWS1 579 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 MED29Q9NX70 200 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 IL20RAQ9UHF4 553 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 NCOA6Q14686 2063 aaPredicted RBP12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 HIVEP3Q5T1R4 2406 aa12.49□□□□□ -0.41
APOBEC3B-202ENST00000335760 FAM90A27PA6NNH2 459 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 EEF1E1-BLOC1S5C9J1V9 151 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 MCIDASD6RGH6 385 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 PDLIM1O00151 329 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 EEF1E1O43324 174 aaKnown RBP12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 AKAP8O43823 692 aaKnown RBP12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 CGAP01215 116 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 AGAP20933 346 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 DAPP51397 102 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 FXYD6P3P58550 94 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 COX10Q12887 443 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 MELKQ14680 651 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 CDSNQ15517 529 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 RFX4Q33E94 735 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 FAHD1Q6P587 224 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 KLHL17Q6TDP4 642 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 CD300LDQ6UXZ3 194 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 THSD4Q6ZMP0 1018 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF620Q6ZNG0 422 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 RASSF6Q6ZTQ3 369 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 KIF18BQ86Y91 864 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF100Q8IYN0 542 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 FAM26EQ8N5C1 309 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF610Q8N9Z0 462 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 LILRB4Q8NHJ6 448 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 SAMD8Q96LT4 415 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 CIB1Q99828 191 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 EMC6Q9BV81 110 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 ENKD1Q9H0I2 346 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 OPN3Q9H1Y3 402 aaPredicted RBP12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 OR52D1Q9H346 318 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 EGLN3Q9H6Z9 239 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 SMURF2Q9HAU4 748 aa12.48□□□□□ -0.41
APOBEC3B-202ENST00000335760 SLC35F4A4IF30 521 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF726A6NNF4 738 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 SOX14O95416 240 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 BCL10O95999 233 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 IGFBP1P08833 259 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 RNF224P0DH78 156 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 CD8BP10966 210 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 EDNRAP25101 427 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 OR3A2P47893 321 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 SELENOPP49908 381 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 DAP3P51398 398 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 BIDP55957 195 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 ERVK-25P63136 954 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 TOP3AQ13472 1001 aaPredicted RBP12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 ACKR1Q16570 336 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 SLC25A35Q3KQZ1 300 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 TFAP2EQ6VUC0 442 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 LUZP2Q86TE4 346 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 OR2M2Q96R28 347 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 KATNB1Q9BVA0 655 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 POLDIP3Q9BY77 421 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 TXNIPQ9H3M7 391 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 PRSS50Q9UI38 385 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF346Q9UL40 294 aaKnown RBP12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 RCE1Q9Y256 329 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 CDH10Q9Y6N8 788 aa12.47□□□□□ -0.41
APOBEC3B-202ENST00000335760 INTS1Q8N201 2190 aaKnown RBP12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CLEC18AA5D8T8 446 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 NKX2-6A6NCS4 301 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 WIPF3A6NGB9 483 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 MSTNO14793 375 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 SLC43A1O75387 559 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 ZNF432O94892 652 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CLDN14O95500 239 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 IGHV3-9P01782 118 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 IGHMP01871 453 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 TP53P04637 393 aaPredicted RBP12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CD14P08571 375 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 SLC6A6P31641 620 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 RPL27P61353 136 aaKnown RBP12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CAMK2DQ13557 499 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CARD17Q5XLA6 110 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 RPL13AP3Q6NVV1 102 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CLEC18BQ6UXF7 455 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 DPY19L2P2Q6ZN68 376 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 WDFY1Q8IWB7 410 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 UBE2J2Q8N2K1 259 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CLDN22Q8N7P3 220 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 CLEC18CQ8NCF0 446 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 OR6X1Q8NH79 312 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 SSC4DQ8WTU2 575 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 ASB10Q8WXI3 467 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 ADAD1Q96M93 576 aaKnown RBP12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 TSPAN32Q96QS1 320 aa12.46□□□□□ -0.41
APOBEC3B-202ENST00000335760 IFT27Q9BW83 186 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms