RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 EXOSC3Q9NQT5 275 aaKnown RBP12.71□□□□□ -0.38
SF1-202ENST00000334944 EXOSC1Q9Y3B2 195 aaKnown RBP12.71□□□□□ -0.38
SF1-202ENST00000334944 DISC1C4P0D8 188 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 ACHEP22303 614 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ZCCHC12Q6PEW1 402 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ARL9Q6T311 187 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 BTN2A1Q7KYR7 527 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 OR52L1Q8NGH7 329 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 OR10K1Q8NGX5 313 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 HS6ST2Q96MM7 605 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 TNFRSF13CQ96RJ3 184 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 TSNAXQ99598 290 aaKnown RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 TEX12Q9BXU0 123 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 BIN3Q9NQY0 253 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 RCE1Q9Y256 329 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 PCDH15Q96QU1 1955 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 TNFRSF10CO14798 259 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 YKT6O15498 198 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 PEX14O75381 377 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 HTR1FP30939 366 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 SNRPEP62304 92 aaKnown RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 UBE2IP63279 158 aaKnown RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 PSG6Q00889 435 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ZNF528Q3MIS6 628 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ARMC6Q6NXE6 501 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 CD200R1LQ6Q8B3 271 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ZNF322Q6U7Q0 402 aaPredicted RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 HSD17B13Q7Z5P4 300 aaPredicted RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 FGD2Q7Z6J4 655 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 SAMD14Q8IZD0 417 aaPredicted RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 PUSL1Q8N0Z8 303 aaKnown RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 KLHL36Q8N4N3 616 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 MEIOBQ8N635 442 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 OR11G2Q8NGC1 345 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 GPBAR1Q8TDU6 330 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 MAP3K3Q99759 626 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 FN3KQ9H479 309 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 C14orf105Q9NVL8 296 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 WSB2Q9NYS7 404 aaPredicted RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 ZNF223Q9UK11 482 aaPredicted RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 UNC13CQ8NB66 2214 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 WDFY3Q8IZQ1 3526 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 TRIOBPQ9H2D6 2365 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 OR6C68A6NDL8 312 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 AGR2O95994 175 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 HOXC4P09017 264 aaPredicted RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 GABRA1P14867 456 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 IL9P15248 144 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ACVR1BP36896 505 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 SLC3A1Q07837 685 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 STX4Q12846 297 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 CRMP1Q14194 572 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 C2orf68Q2NKX9 166 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 EIPR1Q53HC9 387 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 EOGTQ5NDL2 527 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ZNF660Q6AZW8 331 aaPredicted RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 OOSP2Q86WS3 158 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 LDLRAD3Q86YD5 345 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 SERPINA12Q8IW75 414 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 ALG8Q9BVK2 526 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 LYRM4Q9HD34 91 aa12.7□□□□□ -0.38
SF1-202ENST00000334944 MRPS18AQ9NVS2 196 aaKnown RBP12.7□□□□□ -0.38
SF1-202ENST00000334944 COL6A3P12111 3177 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 SPAG17Q6Q759 2223 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 A0A1B0GWA3 101 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 SHISA7A6NL88 538 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 BHLHE40O14503 412 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 BRINP1O60477 761 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 RNF224P0DH78 156 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 MRPS21P82921 87 aaKnown RBP12.69□□□□□ -0.38
SF1-202ENST00000334944 FOXK2Q01167 660 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 GK2Q14410 553 aaPredicted RBP12.69□□□□□ -0.38
SF1-202ENST00000334944 RNLSQ5VYX0 342 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 NIPAL3Q6P499 406 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 GSG1LQ6UXU4 331 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 RAB11FIP2Q7L804 512 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 OR5M1Q8NGP8 315 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 OR13C5Q8NGS8 318 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 OR56B4Q8NH76 319 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 RPH3AQ9Y2J0 694 aaPredicted RBP12.69□□□□□ -0.38
SF1-202ENST00000334944 MPDZO75970 2070 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 SPTY2D1-AS1A0A0U1RR47 76 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 DAPL1A0PJW8 107 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 TUBAL3A6NHL2 446 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 LYPD3O95274 346 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 PTAFRP25105 342 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 C12orf45Q8N5I9 185 aaPredicted RBP12.69□□□□□ -0.38
SF1-202ENST00000334944 RBM18Q96H35 190 aaKnown RBP12.69□□□□□ -0.38
SF1-202ENST00000334944 ANKRD19PQ9H560 264 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 FBRSQ9HAH7 460 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 DUSP22Q9NRW4 184 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 POT1Q9NUX5 634 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 LRIT1Q9P2V4 623 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 MMP17Q9ULZ9 603 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 MED31Q9Y3C7 131 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 MUC3AQ02505 3323 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 RP1P56715 2156 aa12.69□□□□□ -0.38
SF1-202ENST00000334944 C4orf47A7E2U8 309 aa12.68□□□□□ -0.38
SF1-202ENST00000334944 J3QLW9 94 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms