RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PHOX2AO14813 284 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 IL5P05113 134 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF26P17031 533 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 P2RX3P56373 397 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 NPY5RQ15761 445 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 LYG2Q86SG7 212 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ARL14EPQ8N8R7 260 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 LMO3Q8TAP4 145 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 NDFIP1Q9BT67 221 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SMIM3Q9BZL3 60 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZDHHC11Q9H8X9 412 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RAB18Q9NP72 206 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RTCAO00442 366 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PDGFBP01127 241 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 DAPP51397 102 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SIM1P81133 766 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF90Q03938 601 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 EEF1A2Q05639 463 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ARHGAP11BQ3KRB8 267 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PM20D1Q6GTS8 502 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ADAM5Q6NVV9 412 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CXCL17Q6UXB2 119 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 FJX1Q86VR8 437 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CLEC1AQ8NC01 280 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 OR52B6Q8NGF0 335 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TMEM106AQ96A25 262 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TRAPPC6AO75865 159 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 DDAH2O95865 285 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SMIM18P0DKX4 95 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF8P17098 575 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GABRR1P24046 479 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 MAP2K6P52564 334 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CASP6P55212 293 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RPEL1Q2QD12 228 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ENTPD8Q5MY95 495 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 NCR3LG1Q68D85 454 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RPL7L1Q6DKI1 246 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 FAHD2BQ6P2I3 314 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 EIF4E3Q8N5X7 224 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SFT2D1Q8WV19 159 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 FAHD2AQ96GK7 314 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 OR2A14Q96R47 310 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RIMS4Q9H426 269 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CSAG2Q9Y5P2 127 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 OR5K3A6NET4 321 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RAB27BO00194 218 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 P04436 131 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GABRB1P18505 474 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PSMB6P28072 239 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 EGR3Q06889 387 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PPP1R8Q12972 351 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 FCRL6Q6DN72 434 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 Q6ZRG5 221 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CLEC14AQ86T13 490 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 SYS1Q8N2H4 156 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CSNK1A1LQ8N752 337 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF611Q8N823 705 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 NAXEQ8NCW5 288 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 OR1F2PQ96R84 312 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GOLGA2P5Q9HBQ8 144 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CORINQ9Y5Q5 1042 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 MCRIP1C9JLW8 97 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 HOXC11O43248 304 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GPR17Q13304 367 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF628Q5EBL2 1059 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 C17orf107Q6ZR85 190 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 KLHDC8AQ8IYD2 350 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 PELI3Q8N2H9 469 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 ARL6IP6Q8N6S5 226 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 GPR152Q8TDT2 470 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 RAB24Q969Q5 203 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 EMID1Q96A84 441 aaPredicted RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 HHIPL1Q96JK4 782 aa5.13□□□□□ -1.59
PTPRB-202ENST00000334414 CPEB1Q9BZB8 566 aaKnown RBP5.13□□□□□ -1.59
PTPRB-202ENST00000334414 TMEM269A0A1B0GVZ9 245 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 TMEM218A2RU14 115 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 GPR171O14626 319 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 CSNK1A1P48729 337 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 OR2B8PP59922 312 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 GRM7Q14831 915 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 VWA2Q5GFL6 755 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 RAET1LQ5VY80 246 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 BAP18Q8IXM2 172 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 GALNT16Q8N428 558 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 SMIM4Q8WVI0 70 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 EMG1Q92979 244 aaKnown RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 NEURL3Q96EH8 262 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 GALNT9Q9HCQ5 603 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 BET1LQ9NYM9 111 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 HSFX1Q9UBD0 423 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 OPN1MWP04001 364 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 OPN1MW2P0DN77 364 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 OPN1MW3P0DN78 364 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 SLC2A1P11166 492 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 CTRB1P17538 263 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 MRPL19P49406 292 aaKnown RBP5.12□□□□□ -1.59
PTPRB-202ENST00000334414 ERVPABLB-1P60509 514 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 SAXO2Q658L1 398 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 CTRB2Q6GPI1 263 aa5.12□□□□□ -1.59
PTPRB-202ENST00000334414 FRMPD2BQ6IN97 320 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms