RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 DNTTIP1Q9H147 329 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 HAO2Q9NYQ3 351 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 KLF2Q9Y5W3 355 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ALPK2Q86TB3 2170 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 SGCEO43556 437 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ZFPL1O95159 310 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 EGFP01133 1207 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 DBIP07108 87 aaKnown RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 DUSP8Q13202 625 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 HAGHLQ6PII5 290 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 MCATQ8IVS2 390 aaKnown RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 OR5T2Q8NGG2 359 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 OR4D10Q8NGI6 311 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 DVL3Q92997 716 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 PTCHD1Q96NR3 888 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 INSM2Q96T92 566 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 GAL3ST1Q99999 423 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF471Q9BX82 626 aaPredicted RBP12.58□□□□□ -0.4
SYNE3-201ENST00000334258 ADAM18Q9Y3Q7 739 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.4
SYNE3-201ENST00000334258 OR52A4PA6NMU1 304 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 SIGLEC6O43699 453 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 GPRIN2O60269 458 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 AQP8O94778 261 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 FGL1Q08830 312 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 TRMT12Q53H54 448 aaKnown RBP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 BEST3Q8N1M1 668 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 ZCCHC10Q8TBK6 192 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 NMNAT3Q96T66 252 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 SLC25A32Q9H2D1 315 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 C2orf42Q9NWW7 574 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 KANTRA0A1W2PQU2 76 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 GXYLT2A0PJZ3 443 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 PRRT4C9JH25 899 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 LUMP51884 338 aaPredicted RBP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 ILF3Q12906 894 aaKnown RBP eCLIP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 ARHGAP11BQ3KRB8 267 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 JAZF1Q86VZ6 243 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF619Q8N2I2 560 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 EIF4E3Q8N5X7 224 aaKnown RBP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 C15orf40Q8WUR7 153 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 OR8D1Q8WZ84 308 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 PDCD10Q9BUL8 212 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 CHST6Q9GZX3 395 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 ANKRD10Q9NXR5 420 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 APOBEC3BQ9UH17 382 aaKnown RBP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 DOCK9Q9BZ29 2069 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 A0A087WV48 116 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 NID1P14543 1247 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 GXYLT1Q4G148 440 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 PSRC1Q6PGN9 363 aaPredicted RBP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 POMGNT2Q8NAT1 580 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 MENTQ9BUN1 341 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 COA4Q9NYJ1 87 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 MOKQ9UQ07 419 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 OR1A2Q9Y585 309 aa12.57□□□□□ -0.4
SYNE3-201ENST00000334258 ARID1BQ8NFD5 2236 aaPredicted RBP12.57□□□□□ -0.4
SYNE3-201ENST00000334258 IMPA2O14732 288 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 GUCA2AQ02747 115 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 LTBQ06643 244 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 DHCR24Q15392 516 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 TAF13Q15543 124 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 DCST2Q5T1A1 773 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 STAC2Q6ZMT1 411 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 OR4K14Q8NGD5 310 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 PURGQ9UJV8 347 aaKnown RBP12.56□□□□□ -0.4
SYNE3-201ENST00000334258 TRAV18A0A075B6X5 111 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 DPTQ07507 201 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 CCINQ13939 588 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 ZIC1Q15915 447 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 CCDC157Q569K6 752 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF765Q7L2R6 523 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 SLC16A13Q7RTY0 426 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 SLC36A1Q7Z2H8 476 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 STK35Q8TDR2 534 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 PHYHIPQ92561 330 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 IL21RQ9HBE5 538 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 PLXNA2O75051 1894 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 GPR31O00270 319 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 ABCD4O14678 606 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 RASGRP1O95267 797 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 THBS1P07996 1170 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 PVALBP20472 110 aaPredicted RBP12.56□□□□□ -0.4
SYNE3-201ENST00000334258 NANOS3P60323 173 aaKnown RBP12.56□□□□□ -0.4
SYNE3-201ENST00000334258 ALG10BQ5I7T1 473 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 PABPC1L2AQ5JQF8 200 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 FAM78AQ5JUQ0 283 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 FGF13Q92913 245 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 MFRPQ9BY79 579 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 NKX2-4Q9H2Z4 354 aa12.56□□□□□ -0.4
SYNE3-201ENST00000334258 A0A1B0GWA3 101 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 UBBP0CG47 229 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 UBCP0CG48 685 aaKnown RBP12.55□□□□□ -0.4
SYNE3-201ENST00000334258 RD3LP0DJH9 198 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 OR8G3PP0DMU2 310 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 RPA2P15927 270 aa12.55□□□□□ -0.4
SYNE3-201ENST00000334258 MST1P26927 711 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms