RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 RNF122Q9H9V4 155 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 TCF7L1Q9HCS4 588 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 ACKR4Q9NPB9 350 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 NIT2Q9NQR4 276 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 MBD2Q9UBB5 411 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 CHRNA9Q9UGM1 479 aa11.68□□□□□ -0.54
CCDC60-201ENST00000327554 C5orf52A6NGY3 159 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 COLCA2A8K830 154 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 OR2T1O43869 369 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CD79AP11912 226 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 FOLR2P14207 255 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CERS1P27544 350 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 GABRR2P28476 465 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CTGFP29279 349 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 ATXN7L3Q14CW9 347 aaPredicted RBP11.67□□□□□ -0.54
CCDC60-201ENST00000327554 DUSP5Q16690 384 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 LRRC37A5PQ49AS3 106 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 ANKRD16Q6P6B7 361 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 ABHD17CQ6PCB6 329 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 C5orf46Q6UWT4 87 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SLC35F3Q8IY50 421 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 OR4K14Q8NGD5 310 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CYB5D2Q8WUJ1 264 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CCDC107Q8WV48 283 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SDF2Q99470 211 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 MNTQ99583 582 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SEC11CQ9BY50 192 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 IL36AQ9UHA7 158 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 STEAP1Q9UHE8 339 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 KCNE5Q9UJ90 142 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 INSL5Q9Y5Q6 135 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 LEFTY2O00292 366 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 UBE2CO00762 179 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SMAD9O15198 467 aaKnown RBP11.67□□□□□ -0.54
CCDC60-201ENST00000327554 FADS1O60427 444 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 ICOSLGO75144 302 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CTAG2O75638 210 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SPI1P17947 270 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 RPS4Y1P22090 263 aaKnown RBP11.67□□□□□ -0.54
CCDC60-201ENST00000327554 BCL6P41182 706 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 GPR1P46091 355 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 DIO1P49895 249 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SREBF2Q12772 1141 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 TAF13Q15543 124 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 VWA2Q5GFL6 755 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 STEAP1BQ6NZ63 245 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 ENPP7Q6UWV6 458 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 MISPQ8IVT2 679 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 OR1J2Q8NGS2 313 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 OR8S1Q8NH09 359 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CD99L2Q8TCZ2 262 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 EDARADDQ8WWZ3 215 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 FGF13Q92913 245 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF514Q96K75 400 aaPredicted RBP11.67□□□□□ -0.54
CCDC60-201ENST00000327554 MRGPRX3Q96LB0 322 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 CNTNAP3BQ96NU0 1288 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 GPR174Q9BXC1 333 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SLITRK2Q9H156 845 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SEBOXQ9HB31 216 aaPredicted RBP11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SLC23A2Q9UGH3 650 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 FBXO4Q9UKT5 387 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 GPR34Q9UPC5 381 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 SCN3AQ9NY46 2000 aa11.67□□□□□ -0.54
CCDC60-201ENST00000327554 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
CCDC60-201ENST00000327554 F5H0A9 414 aaPredicted RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 IMPA2O14732 288 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 RNGTTO60942 597 aaKnown RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 NDUFS6O75380 124 aaKnown RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 S100A9P06702 114 aaKnown RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 FOSL1P15407 271 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 SOX2P48431 317 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 ATP1B3P54709 279 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 PLAURQ03405 335 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 IRF4Q15306 451 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 NR0B2Q15466 257 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 INPP5JQ15735 1006 aaPredicted RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 Q499Y3 187 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 ZNF684Q5T5D7 378 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 USP53Q70EK8 1073 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 PAQR8Q8TEZ7 354 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 ARL11Q969Q4 196 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 OR51M1Q9H341 326 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TMEM231Q9H6L2 316 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TRPV4Q9HBA0 871 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 MYOZ1Q9NP98 299 aaPredicted RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TMEM100Q9NV29 134 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 ABT1Q9ULW3 272 aaKnown RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TRAV8-7A0A075B6U6 113 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TBC1D3KA0A087X1G2 549 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 NPIPA5A0A0B4J1W7 369 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TBC1D3BA6NDS4 549 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 TBC1D3FA6NER0 549 aaPredicted RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 NPIPA7E9PJI5 369 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 CCSO14618 274 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 RDH16O75452 317 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 ANXA2P07355 339 aaKnown RBP11.66□□□□□ -0.54
CCDC60-201ENST00000327554 NPIPA8P0DM63 369 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 LAMP2P13473 410 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 CBR1P16152 277 aa11.66□□□□□ -0.54
CCDC60-201ENST00000327554 METAP1P53582 386 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms