RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 TMEFF1Q8IYR6 380 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 SHISA5Q8N114 240 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 TMEM52Q8NDY8 209 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 OR4D10Q8NGI6 311 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 RBM18Q96H35 190 aaKnown RBP15.27■□□□□ 0.03
SSH1-201ENST00000326470 ALG12Q9BV10 488 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 ZNF416Q9BWM5 594 aa15.27■□□□□ 0.03
SSH1-201ENST00000326470 CXXC1Q9P0U4 656 aaPredicted RBP15.27■□□□□ 0.03
SSH1-201ENST00000326470 THAP10Q9P2Z0 257 aaPredicted RBP15.27■□□□□ 0.03
SSH1-201ENST00000326470 DNASE2O00115 360 aaPredicted RBP15.26■□□□□ 0.03
SSH1-201ENST00000326470 OR8G3PP0DMU2 310 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 ITGB8P26012 769 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 GPR143P51810 404 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 ZNF169Q14929 603 aaPredicted RBP15.26■□□□□ 0.03
SSH1-201ENST00000326470 CST6Q15828 149 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 ABHD13Q7L211 337 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 PXT1Q8NFP0 134 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 MARC2Q969Z3 335 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 CTHRC1Q96CG8 243 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 Q96M85 177 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 IL23AQ9NPF7 189 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 PCDHB16Q9NRJ7 776 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 FRRS1LQ9P0K9 344 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 A0A1B0GW55 424 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 FAM171A2A8MVW0 826 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 CDC123O75794 336 aaPredicted RBP15.26■□□□□ 0.03
SSH1-201ENST00000326470 ANXA2P07355 339 aaKnown RBP15.26■□□□□ 0.03
SSH1-201ENST00000326470 DUX4L2P0CJ85 424 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 DUX4L3P0CJ86 424 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 DUX4L4P0CJ87 422 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 DUX4L5P0CJ88 424 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 DUX4L6P0CJ89 424 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 DUX4L7P0CJ90 424 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 RAB3AP20336 220 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 LBX1P52954 281 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 ERVK-25P63136 954 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 SORDQ00796 357 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 LIPNQ5VXI9 398 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 ANKRD16Q6P6B7 361 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 ZNF550Q7Z398 422 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 MCATQ8IVS2 390 aaKnown RBP15.26■□□□□ 0.03
SSH1-201ENST00000326470 HOXB13Q92826 284 aaPredicted RBP15.26■□□□□ 0.03
SSH1-201ENST00000326470 CCDC74AQ96AQ1 378 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 DNTTIP1Q9H147 329 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 TMEM138Q9NPI0 162 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 DUX4Q9UBX2 424 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 STEAP1Q9UHE8 339 aa15.26■□□□□ 0.03
SSH1-201ENST00000326470 MRM2Q9UI43 246 aaKnown RBP15.26■□□□□ 0.03
SSH1-201ENST00000326470 GGT3PA6NGU5 568 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 RFPL4AA6NLU0 287 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 RFPL4AL1F8VTS6 287 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 PRAMEF2O60811 474 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 KDM4BO94953 1096 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 IFI6P09912 130 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 AKAIN1P0CW23 69 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 ACRP10323 421 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 GXYLT1Q4G148 440 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 C11orf88Q6PI97 169 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 C17orf107Q6ZR85 190 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 SLC16A9Q7RTY1 509 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 ZNF227Q86WZ6 799 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 ZNF511Q8NB15 262 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 OR51S1Q8NGJ8 323 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 FLVCR1-AS1Q8TAF5 88 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 SLC22A18Q96BI1 424 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 LMAN2LQ9H0V9 348 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 CAPN10Q9HC96 672 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 APMAPQ9HDC9 416 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 ZNF337Q9Y3M9 751 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 SCN2AQ99250 2005 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 TMEM72A0PK05 275 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 CYR61O00622 381 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 CBX7O95931 251 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 MAS1P04201 325 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 CSF2RBP32927 897 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 RELL2Q8NC24 303 aaPredicted RBP15.25■□□□□ 0.03
SSH1-201ENST00000326470 CAMKVQ8NCB2 501 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 CLRN3Q8NCR9 226 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 TBC1D29Q9UFV1 150 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 KLHDC2Q9Y2U9 406 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 MRPS2Q9Y399 296 aaKnown RBP15.25■□□□□ 0.03
SSH1-201ENST00000326470 SPACA6W5XKT8 324 aa15.25■□□□□ 0.03
SSH1-201ENST00000326470 TRAV8-7A0A075B6U6 113 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 A0A087WUJ7 227 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 A0A1W2PP55 124 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 EML2O95834 649 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 ABHD16AO95870 558 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 GTF2F2P13984 249 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 MGMTP16455 207 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 MST1P26927 711 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 SGCGQ13326 291 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 LEG1Q6P5S2 330 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 PRSS41Q7RTY9 318 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 OR52R1Q8NGF1 315 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 ADAD1Q96M93 576 aaKnown RBP15.24■□□□□ 0.03
SSH1-201ENST00000326470 NPAS1Q99742 590 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 ALX4Q9H161 411 aaPredicted RBP15.24■□□□□ 0.03
SSH1-201ENST00000326470 SRMSQ9H3Y6 488 aa15.24■□□□□ 0.03
SSH1-201ENST00000326470 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.24■□□□□ 0.03
SSH1-201ENST00000326470 PILRAQ9UKJ1 303 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms