RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 ATP4BP51164 291 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 CDH12P55289 794 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 PCBP3P57721 371 aaKnown RBP10.69□□□□□ -0.7
TPM3-204ENST00000323144 OR1Q1Q15612 314 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 C3orf36Q3SXR2 165 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 C1QTNF12Q5T7M4 302 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 KRT80Q6KB66 452 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 C5orf46Q6UWT4 87 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 DLEU7Q6UYE1 221 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 ARMC8Q8IUR7 673 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 UEVLDQ8IX04 471 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 ZCCHC24Q8N2G6 241 aaKnown RBP10.69□□□□□ -0.7
TPM3-204ENST00000323144 HIPK4Q8NE63 616 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 PIK3C3Q8NEB9 887 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 NUP37Q8NFH4 326 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 OR4D11Q8NGI4 311 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 SPATA3Q8NHX4 192 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 DNAJA4Q8WW22 397 aaPredicted RBP10.69□□□□□ -0.7
TPM3-204ENST00000323144 PROX1Q92786 737 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 SLC41A3Q96GZ6 507 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 ATP6V1G3Q96LB4 118 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 ZNF317Q96PQ6 595 aaPredicted RBP10.69□□□□□ -0.7
TPM3-204ENST00000323144 KCNK17Q96T54 332 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 ZNF224Q9NZL3 707 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 CDC42EP3Q9UKI2 254 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 ANGPT4Q9Y264 503 aa10.69□□□□□ -0.7
TPM3-204ENST00000323144 CPSF4LA6NMK7 179 aaKnown RBP10.68□□□□□ -0.7
TPM3-204ENST00000323144 ZNF99A8MXY4 864 aaPredicted RBP10.68□□□□□ -0.7
TPM3-204ENST00000323144 B9A039 149 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 MS4A18H0YCH9 400 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 MFN2O95140 757 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 LYPD3O95274 346 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 TGDSO95455 350 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 THY1P04216 161 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 BMP4P12644 408 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 APEHP13798 732 aaKnown RBP10.68□□□□□ -0.7
TPM3-204ENST00000323144 CBR1P16152 277 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 GPX2P18283 190 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 IL2RGP31785 369 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 LSM11P83369 360 aaKnown RBP eCLIP10.68□□□□□ -0.7
TPM3-204ENST00000323144 PUDPQ08623 228 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 MELKQ14680 651 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 CYP51A1Q16850 503 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 MS4A18Q3C1V0 323 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 FAM91A1Q658Y4 838 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 PODNL1Q6PEZ8 512 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 ULK3Q6PHR2 472 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 H1FNTQ75WM6 255 aaPredicted RBP10.68□□□□□ -0.7
TPM3-204ENST00000323144 SPATA21Q7Z572 469 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 RANBP3LQ86VV4 465 aaPredicted RBP10.68□□□□□ -0.7
TPM3-204ENST00000323144 C20orf196Q8IYI0 205 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 VANGL1Q8TAA9 524 aaPredicted RBP10.68□□□□□ -0.7
TPM3-204ENST00000323144 MSI2Q96DH6 328 aaKnown RBP10.68□□□□□ -0.7
TPM3-204ENST00000323144 SLC47A1Q96FL8 570 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 TXNDC15Q96J42 360 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 ARHGDIGQ99819 225 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 SPATA5L1Q9BVQ7 753 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 TPK1Q9H3S4 243 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 ZNF442Q9H7R0 627 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 GMEB1Q9Y692 573 aa10.68□□□□□ -0.7
TPM3-204ENST00000323144 LRP5LA4QPB2 252 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 C11orf98E9PRG8 122 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 KPNA4O00629 521 aaPredicted RBP10.67□□□□□ -0.7
TPM3-204ENST00000323144 OR2T1O43869 369 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 CD247P20963 164 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 SLC6A2P23975 617 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 CRYBA2P53672 197 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 CAMK2DQ13557 499 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 MFSD13AQ14CX5 517 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 KRTAP24-1Q3LI83 254 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 CYB5R2Q6BCY4 276 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 NHLRC1Q6VVB1 395 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 ZNF813Q6ZN06 617 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 RBM45Q8IUH3 476 aaKnown RBP10.67□□□□□ -0.7
TPM3-204ENST00000323144 C10orf53Q8N6V4 93 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 FAM169BQ8N8A8 192 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 SCAIQ8N9R8 606 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 OR6T1Q8NGN1 323 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 DYDC1Q8WWB3 177 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 FOXN4Q96NZ1 517 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 ZNF607Q96SK3 696 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 MCHR1Q99705 422 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 TMEM43Q9BTV4 400 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 ASPNQ9BXN1 380 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 ULBP2Q9BZM5 246 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 DYNLRB1Q9NP97 96 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 TMEM160Q9NX00 188 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 MRPL39Q9NYK5 338 aaKnown RBP10.67□□□□□ -0.7
TPM3-204ENST00000323144 PRDM4Q9UKN5 801 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 USP22Q9UPT9 525 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 CORO2BQ9UQ03 480 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 CORINQ9Y5Q5 1042 aa10.67□□□□□ -0.7
TPM3-204ENST00000323144 SVEP1Q4LDE5 3571 aa10.66□□□□□ -0.7
TPM3-204ENST00000323144 TMEM129A0AVI4 362 aa10.66□□□□□ -0.7
TPM3-204ENST00000323144 PRORSD1PA6NEY8 169 aa10.66□□□□□ -0.7
TPM3-204ENST00000323144 LYNX1G3V0Z9 82 aa10.66□□□□□ -0.7
TPM3-204ENST00000323144 NDUFS8O00217 210 aa10.66□□□□□ -0.7
TPM3-204ENST00000323144 PLPP3O14495 311 aa10.66□□□□□ -0.7
TPM3-204ENST00000323144 CHP2O43745 196 aa10.66□□□□□ -0.7
TPM3-204ENST00000323144 LMX1BO60663 402 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms