RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 MGLLQ99685 303 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 VRK1Q99986 396 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 SRA1Q9HD15 236 aaKnown RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 ACOT13Q9NPJ3 140 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PSORS1C1Q9UIG5 152 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 RNF6Q9Y252 685 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 A0A075B6Q4 140 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 TMED7-TICAM2A0A0A6YYA0 188 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 NADKO95544 446 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 PDGFBP01127 241 aaPredicted RBP7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 C19orf57Q0VDD7 668 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 DOK4Q8TEW6 326 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 CHCHD6Q9BRQ6 235 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 GLRX2Q9NS18 164 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 A4GNTQ9UNA3 340 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 TMED7Q9Y3B3 224 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 DSPPQ9NZW4 1301 aa7.82□□□□□ -1.16
PDLIM5-201ENST00000317968 A0A0B4J2E0 115 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 A0A1B0GX12 115 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ANKUB1A6NFN9 424 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 CLIC3O95833 236 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ELK4P28324 431 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC37A1P57057 533 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 SLC22A25Q6T423 547 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ENAMQ9NRM1 1142 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 C2orf72A6NCS6 295 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ARPC3O15145 178 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 DIRAS3O95661 229 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 F10P00742 488 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 CD53P19397 219 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 PVALBP20472 110 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 CSF2RBP32927 897 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 STARP49675 285 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 PSG6Q00889 435 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 QPRTQ15274 297 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 DDI2Q5TDH0 399 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 MEPCEQ7L2J0 689 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 PHYHIPQ92561 330 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM41AQ96HV5 264 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 HIPK2Q9H2X6 1198 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF71Q9NQZ8 489 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 CTSFQ9UBX1 484 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 PLEKHA6Q9Y2H5 1048 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 MYLKQ15746 1914 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 NPIPA5A0A0B4J1W7 369 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 NPIPA7E9PJI5 369 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 XPNPEP2O43895 674 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 IFNA21P01568 189 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 RLN2P04090 185 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 NPIPA8P0DM63 369 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 WNT4P56705 351 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 EIF2B1Q14232 305 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 VASH2Q86V25 355 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ZNF454Q8N9F8 522 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 C22orf15Q8WYQ4 148 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 MRI1Q9BV20 369 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 OPA3Q9H6K4 179 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 LANCL2Q9NS86 450 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 TMEM74BQ9NUR3 256 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 MYOTQ9UBF9 498 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 DIMT1Q9UNQ2 313 aaKnown RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 A0A087WUJ7 227 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ARPC4-TTLL3A0A0A6YYG9 625 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 LINC00854A0A1B0GVQ3 168 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 FAM172BPA6NC97 362 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 L7N2F9 121 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 GPRIN2O60269 458 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 TBX6O95947 436 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 PTGER1P34995 402 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 NUDT6P53370 316 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 VAMP2P63027 116 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 TUBA3EQ6PEY2 450 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 SPARTQ8N0X7 666 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 CLIP4Q8N3C7 705 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ASB17Q8WXJ9 295 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 KISS1RQ969F8 398 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ZDHHC16Q969W1 377 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 AMBNQ9NP70 447 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 IL20Q9NYY1 176 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 ERVK-18Q9QC07 812 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 KCNS2Q9ULS6 477 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 HDGFL3Q9Y3E1 203 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 A0A1B0GUH1 482 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 J3KTA2 159 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 EVI2BP34910 448 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 RAD52P43351 418 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 MEOX1P50221 254 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 CRTC2Q53ET0 693 aaPredicted RBP7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 LRFN4Q6PJG9 635 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 OR5J2Q8NH18 312 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 CCDC107Q8WV48 283 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 UBQLN3Q9H347 655 aa7.81□□□□□ -1.16
PDLIM5-201ENST00000317968 A0A1W2PQM1 296 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 MEGF11A6BM72 1044 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 CLDN24A6NM45 220 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 FZD7O75084 574 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 STSP08842 583 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ADH6P28332 368 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 HTR1FP30939 366 aa7.8□□□□□ -1.16
PDLIM5-201ENST00000317968 ATP1B3P54709 279 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms