RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 GNG8Q9UK08 70 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 MKL2Q9ULH7 1088 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 ADAM18Q9Y3Q7 739 aa12.89□□□□□ -0.35
VRK3-201ENST00000316763 A0A0G2JK05 382 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 TRBV2A0A0J9YWF9 115 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 VSTM2BA6NLU5 285 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 NOTOA8MTQ0 251 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 GPRIN2O60269 458 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 CPNE3O75131 537 aaKnown RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 YES1P07947 543 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 SPI1P17947 270 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 EDNRAP25101 427 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 HCCSP53701 268 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 RPS4XP62701 263 aaKnown RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 ERVK-25P63136 954 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 ELAVL1Q15717 326 aaKnown RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 NSDHLQ15738 373 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 JAZF1Q86VZ6 243 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 TMPRSS12Q86WS5 348 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 C10orf53Q8N6V4 93 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 OR51L1Q8NGJ5 315 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 RNF31Q96EP0 1072 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 DMRTB1Q96MA1 342 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 NMNAT3Q96T66 252 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 CMKLR1Q99788 373 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 MARVELD1Q9BSK0 173 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 THAP7Q9BT49 309 aaPredicted RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 SLC26A1Q9H2B4 701 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 CLCA3PQ9Y6N3 262 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 LRRN3E7EW58 273 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 MEN1O00255 615 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 FZD7O75084 574 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 GLCEO94923 617 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 FAM157BP0CG42 384 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 CCR4P51679 360 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 PITPNAQ00169 270 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 CCDC92Q53HC0 331 aaPredicted RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 BICRALQ6AI39 1079 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 IL20RBQ6UXL0 311 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 RAB11FIP2Q7L804 512 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 TMEM151BQ8IW70 566 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 GATSQ8NAP1 163 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 OR6K6Q8NGW6 343 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 LIPHQ8WWY8 451 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 CREB3L1Q96BA8 519 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 TTTY10Q9BZA0 68 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 NMNAT2Q9BZQ4 307 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 RANGRFQ9HD47 186 aaPredicted RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 RPRD1BQ9NQG5 326 aaKnown RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 AKAP7Q9P0M2 348 aaPredicted RBP12.88□□□□□ -0.35
VRK3-201ENST00000316763 ALG5Q9Y673 324 aa12.88□□□□□ -0.35
VRK3-201ENST00000316763 A0A0B4J293 547 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 A0A1W2PNU3 283 aaPredicted RBP12.87□□□□□ -0.35
VRK3-201ENST00000316763 PMS2P1A4D2B8 440 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 ZNF879B4DU55 563 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 ZNF264O43296 627 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 UTS2O95399 124 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 IGKV3-11P04433 115 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 UCHL1P09936 223 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
VRK3-201ENST00000316763 SLC25A35Q3KQZ1 300 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 FNDC7Q5VTL7 733 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 BAIAP2L2Q6UXY1 529 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 ATG4DQ86TL0 474 aaPredicted RBP12.87□□□□□ -0.35
VRK3-201ENST00000316763 NOXA1Q86UR1 476 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 PRSS58Q8IYP2 241 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 RFLNBQ8N5W9 214 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 RASD2Q96D21 266 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 DDOQ99489 341 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 NANSQ9NR45 359 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 LOXL2Q9Y4K0 774 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 NUP210LQ5VU65 1888 aa12.87□□□□□ -0.35
VRK3-201ENST00000316763 IGKV1D-42A0A075B6H8 117 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 CCDC187A0A096LP49 1063 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 OR6C68A6NDL8 312 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 FRG2CA6NGY1 282 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 INMT-MINDY4F8WBC2 141 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 BLOC1S5-TXNDC5H3BN57 136 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 IMPA2O14732 288 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 SELENOFO60613 162 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 DDAH2O95865 285 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 CD14P08571 375 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ZNF28P17035 718 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 S100A1P23297 94 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 AHCYP23526 432 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 LCN1P31025 176 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 SLC25A1P53007 311 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 SLC37A1P57057 533 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 RAB25P57735 213 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 BTG1P62324 171 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 SKP2Q13309 424 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 ZNF74Q16587 644 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 TIGD3Q6B0B8 471 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 LCN10Q6JVE6 187 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 LEG1Q6P5S2 330 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 TCTE3Q8IZS6 198 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 OR13C5Q8NGS8 318 aa12.86□□□□□ -0.35
VRK3-201ENST00000316763 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms