RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 GTF2A1LQ9UNN4 478 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 ZNF254O75437 659 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 NDUFB2O95178 105 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 CXCL14O95715 111 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 SPI1P17947 270 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 GPR85P60893 370 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 ILF3Q12906 894 aaKnown RBP eCLIP13.42□□□□□ -0.26
COL6A2-202ENST00000310645 OR2W3Q7Z3T1 314 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 STEAP2Q8NFT2 490 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 OR1S2Q8NGQ3 325 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 OR14A16Q8NHC5 309 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 C10orf90Q96M02 699 aa13.42□□□□□ -0.26
COL6A2-202ENST00000310645 ADAD1Q96M93 576 aaKnown RBP13.42□□□□□ -0.26
COL6A2-202ENST00000310645 VRK1Q99986 396 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-202ENST00000310645 ESRP2Q9H6T0 727 aaKnown RBP13.42□□□□□ -0.26
COL6A2-202ENST00000310645 MBNL1Q9NR56 388 aaKnown RBP13.42□□□□□ -0.26
COL6A2-202ENST00000310645 MYEF2Q9P2K5 600 aaKnown RBP13.42□□□□□ -0.26
COL6A2-202ENST00000310645 MPTX1A8MV57 137 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 GRXCR1A8MXD5 290 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 RNGTTO60942 597 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 PAK4O96013 591 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 GLAP06280 429 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 UBBP0CG47 229 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 UBCP0CG48 685 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 CALCBP10092 127 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 MGMTP16455 207 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 RPS27AP62979 156 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 UBA52P62987 128 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 UNQ6126/PRO20091Q6UXV3 157 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 RNF44Q7L0R7 432 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 UQCC2Q9BRT2 126 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 UTP23Q9BRU9 249 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 FARSAQ9Y285 508 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 PLEKHA6Q9Y2H5 1048 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 ZNF337Q9Y3M9 751 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 TVP23AA6NH52 213 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 PRICKLE3O43900 615 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 Q499Y3 187 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 SCGB2B2Q4G0G5 96 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 LIPNQ5VXI9 398 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 RAB12Q6IQ22 244 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 ERN2Q76MJ5 926 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 SLC35F3Q8IY50 421 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 ZNF676Q8N7Q3 588 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 LMF1Q96S06 567 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 ZMAT3Q9HA38 289 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 SRA1Q9HD15 236 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 CHRNA9Q9UGM1 479 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 PCDHB10Q9UN67 800 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 OR5H14A6NHG9 310 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 SLC25A12O75746 678 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 AKAIN1P0CW23 69 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 EMDP50402 254 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 MANEAQ5SRI9 462 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 FAM220AQ7Z4H9 259 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 LDLRAD3Q86YD5 345 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 C10orf53Q8N6V4 93 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 OR51A4Q8NGJ6 313 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 OR6N1Q8NGY5 312 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 COX14Q96I36 57 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 MFRPQ9BY79 579 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 COMMD9Q9P000 198 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 CYB5R1Q9UHQ9 305 aa13.41□□□□□ -0.26
COL6A2-202ENST00000310645 NOP16Q9Y3C1 178 aaKnown RBP13.41□□□□□ -0.26
COL6A2-202ENST00000310645 ATG2BQ96BY7 2078 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
COL6A2-202ENST00000310645 BLOC1S5-TXNDC5H3BN57 136 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 CSF1P09603 554 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 HOXA1P49639 335 aaPredicted RBP13.4□□□□□ -0.26
COL6A2-202ENST00000310645 HTRA4P83105 476 aaPredicted RBP13.4□□□□□ -0.26
COL6A2-202ENST00000310645 TMEM106AQ96A25 262 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 DNAJA3Q96EY1 480 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 MRPL48Q96GC5 212 aaKnown RBP13.4□□□□□ -0.26
COL6A2-202ENST00000310645 CMSS1Q9BQ75 279 aaKnown RBP13.4□□□□□ -0.26
COL6A2-202ENST00000310645 TMEM231Q9H6L2 316 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 XRCC3O43542 346 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 GP1BAP07359 652 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 OR4E1P0C645 316 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 PRSS3P35030 304 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 PSMD4P55036 377 aaKnown RBP13.4□□□□□ -0.26
COL6A2-202ENST00000310645 PLAURQ03405 335 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 STEAP1BQ6NZ63 245 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 LEG1Q6P5S2 330 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 ZNF227Q86WZ6 799 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
COL6A2-202ENST00000310645 FGF13Q92913 245 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 ICAM5Q9UMF0 924 aa13.4□□□□□ -0.26
COL6A2-202ENST00000310645 A0A0B4J2E0 115 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 A0A1B0GX12 115 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 OR14I1A6ND48 311 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 GGT3PA6NGU5 568 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 CPMP14384 443 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 BDKRB2P30411 391 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 P2RY2P41231 377 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 WASP42768 502 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 KCNJ3P48549 501 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 DEFB103AP81534 67 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 RUNX2Q13950 521 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 CCDC157Q569K6 752 aa13.39□□□□□ -0.27
COL6A2-202ENST00000310645 LHX8Q68G74 356 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms