RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 AADACL4Q5VUY2 407 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 C22orf42Q6IC83 251 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 ADNP2Q6IQ32 1131 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SLC27A4Q6P1M0 643 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 FAM198BQ6UWH4 519 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF782Q6ZMW2 699 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 DEF8Q6ZN54 512 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TRILQ7L0X0 811 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TPRA1Q86W33 373 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 CFAP206Q8IYR0 622 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 ADGRF3Q8IZF5 1079 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 GHDCQ8N2G8 530 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 Q8N402 240 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 RAB42Q8N4Z0 105 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 LILRA3Q8N6C8 439 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 ARIH2OSQ8N7S6 290 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SRFBP1Q8NEF9 429 aaKnown RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 OR5AK3PQ8NH89 298 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 PIGXQ8TBF5 258 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TEX47Q8TBZ9 253 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 DNAJA4Q8WW22 397 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TM9SF4Q92544 642 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 PMM1Q92871 262 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 CREB3L1Q96BA8 519 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 OTULINQ96BN8 352 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SNRNP40Q96DI7 357 aaKnown RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 C1GALT1C1Q96EU7 318 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 RNFT2Q96EX2 444 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 OTUB1Q96FW1 271 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TRMT61AQ96FX7 289 aaKnown RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 MED30Q96HR3 178 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 HYLS1Q96M11 299 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 MAP3K3Q99759 626 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 ARHGDIGQ99819 225 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TREX2Q9BQ50 279 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 C7orf50Q9BRJ6 194 aaKnown RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM43Q9BTV4 400 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 FAIM2Q9BWQ8 316 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 OR52A5Q9H2C5 316 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 KCNN2Q9H2S1 579 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 FN3KQ9H479 309 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 OSGEPL1Q9H4B0 414 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 SLAMF7Q9NQ25 335 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 INPP5EQ9NRR6 644 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 MAN2C1Q9NTJ4 1040 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 ASF1BQ9NVP2 202 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 PAQR5Q9NXK6 330 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 EMC3Q9P0I2 261 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 RHCGQ9UBD6 479 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 FBXW2Q9UKT8 454 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 FARSAQ9Y285 508 aaKnown RBP4.45□□□□□ -1.7
CKS1B-201ENST00000308987 CSAG2Q9Y5P2 127 aa4.45□□□□□ -1.7
CKS1B-201ENST00000308987 A0A087WUU8 490 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 A0A0A6YYD5 115 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 FAM240BA0A1B0GVZ2 78 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 OR6C70A6NIJ9 312 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 A6NL46 340 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 CASKO14936 926 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 NDUFS4O43181 175 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 EMC8O43402 210 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 HCRTR1O43613 425 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 B4GALT2O60909 372 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 KCNJ13O60928 360 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF780AO75290 641 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SH3BGRLO75368 114 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ITGA10O75578 1167 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 POP7O75817 140 aaKnown RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 OR5F1O95221 314 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 APOL3O95236 402 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SOX14O95416 240 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 DDAH2O95865 285 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 TBX6O95947 436 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 AGR2O95994 175 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 GBAP04062 536 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 FHP07954 510 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 IFI6P09912 130 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 CLEC2LP0C7M8 214 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 OR12D1P0DN82 309 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 PEPDP12955 493 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 HTR1FP30939 366 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 PRKAR1BP31321 381 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RORAP35398 523 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 FEN1P39748 380 aaKnown RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SLC1A3P43003 542 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RFX3P48380 749 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ATP12AP54707 1039 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 TAS2R43P59537 309 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RRAS2P62070 204 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RPS25P62851 125 aaKnown RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 GALK2Q01415 458 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 FABP5Q01469 135 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ST3GAL3Q11203 375 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 TP53BP2Q13625 1128 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 CEBPEQ15744 281 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RPE65Q16518 533 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 TATDN3Q17R31 274 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 FLYWCH1Q4VC44 716 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 C6orf183Q5T699 404 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms