RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 C20orf196Q8IYI0 205 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 MUC15Q8N387 334 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 FAM169BQ8N8A8 192 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 TRMT61AQ96FX7 289 aaKnown RBP17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC38A2Q96QD8 506 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 MEPEQ9NQ76 525 aaPredicted RBP17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 FAIMQ9NVQ4 179 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 MOKQ9UQ07 419 aa17.26■□□□□ 0.35
PDZRN3-202ENST00000308537 CHD3Q12873 2000 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 A0A096LNT2 108 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 TRAPPC13A5PLN9 417 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC22A2O15244 555 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 KRT33AO76009 404 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 WNT11O96014 354 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 MT-ATP6P00846 226 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 POU3F1Q03052 451 aaPredicted RBP17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 C1DQ13901 141 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 C3orf36Q3SXR2 165 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 HMBOX1Q6NT76 420 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 ZNF627Q7L945 461 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC46A3Q7Z3Q1 461 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 PXKQ7Z7A4 578 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 UEVLDQ8IX04 471 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 LRRC17Q8N6Y2 441 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 OR5J2Q8NH18 312 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 RNF217Q8TC41 542 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 GTPBP3Q969Y2 492 aaKnown RBP17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 SH3GL1Q99961 368 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 ECSITQ9BQ95 431 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 CACNG6Q9BXT2 260 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 CRLF2Q9HC73 371 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 CMTM6Q9NX76 183 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 TAS2R5Q9NYW4 299 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 SELENONQ9NZV5 590 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC7A7Q9UM01 511 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 CAPN7Q9Y6W3 813 aa17.25■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC35F4A4IF30 521 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 CELA3BP08861 270 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 ASAH2BP0C7U1 165 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 CECR9P0C854 216 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 HOXB1P14653 301 aaPredicted RBP17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 NQO1P15559 274 aaKnown RBP17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 FUT4P22083 530 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 CALCRP30988 508 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 PMS2P3Q13401 168 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 MAPRE2Q15555 327 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 SWI5Q1ZZU3 235 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 C8orf82Q6P1X6 216 aaPredicted RBP17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 CARM1Q86X55 608 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 TREML1Q86YW5 311 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 POU5F2Q8N7G0 328 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 PIK3C3Q8NEB9 887 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 RCN3Q96D15 328 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 MPP4Q96JB8 637 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 LRR1Q96L50 414 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 ZNF75AQ96N20 296 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 ASPNQ9BXN1 380 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 ALG2Q9H553 416 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 NOX3Q9HBY0 568 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 ZNF224Q9NZL3 707 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 POU2F3Q9UKI9 436 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 NOX1Q9Y5S8 564 aa17.24■□□□□ 0.35
PDZRN3-202ENST00000308537 ZNF99A8MXY4 864 aaPredicted RBP17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 FAM220BPB1ANY3 271 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 H7C417 338 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 SEC14L2O76054 403 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 NAAAQ02083 359 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 ZP4Q12836 540 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 MMEL1Q495T6 779 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 ERICH5Q6P6B1 374 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 KLHL24Q6TFL4 600 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 NKAIN4Q8IVV8 208 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 GPR137CQ8N3F9 429 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 RASSF5Q8WWW0 418 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 KATNB1Q9BVA0 655 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC19A3Q9BZV2 496 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 FKRPQ9H9S5 495 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 B3GNT2Q9NY97 397 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 SH3GLB1Q9Y371 365 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 ATP23Q9Y6H3 246 aa17.23■□□□□ 0.35
PDZRN3-202ENST00000308537 FAM171A2A8MVW0 826 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 RNF223E7ERA6 249 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 M0R3G1 203 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 SHOX2O60902 331 aaPredicted RBP17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 CH25HO95992 272 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 APOBEC3AP31941 199 aaPredicted RBP17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 FABP6P51161 128 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 UGT2B15P54855 530 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 HGFACQ04756 655 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 SLC15A3Q8IY34 581 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 FBXL14Q8N1E6 418 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 MAPK1IP1LQ8NDC0 245 aa17.22■□□□□ 0.35
PDZRN3-202ENST00000308537 KPNA4O00629 521 aaPredicted RBP17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 AKAP8O43823 692 aaKnown RBP17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 TSPAN19P0C672 248 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 ADORA3P0DMS8 318 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 IFNGR1P15260 489 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 CBR1P16152 277 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 PAX7P23759 505 aa17.21■□□□□ 0.35
PDZRN3-202ENST00000308537 KDELR2P33947 212 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms