RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PARS2Q7L3T8 475 aaKnown RBP11.72□□□□□ -0.53
USP38-201ENST00000307017 SERPINA11Q86U17 422 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 LMAN1LQ9HAT1 526 aa11.72□□□□□ -0.53
USP38-201ENST00000307017 A0A1W2PRV1 198 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 PRSS38A1L453 326 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 SEC14L6B5MCN3 397 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 SDCBPO00560 298 aaPredicted RBP11.71□□□□□ -0.53
USP38-201ENST00000307017 PHYHO14832 338 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 DSC1Q08554 894 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 ZMAT1Q5H9K5 638 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 PRR27Q6MZM9 219 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 PRRT1Q99946 306 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 IFT172Q9UG01 1749 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 LRIT2A6NDA9 550 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 PTBP3O95758 552 aaKnown RBP11.71□□□□□ -0.53
USP38-201ENST00000307017 F2P00734 622 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 NFYAP23511 347 aaPredicted RBP11.71□□□□□ -0.53
USP38-201ENST00000307017 PKLRP30613 574 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 CHRNB4P30926 498 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 RFC3P40938 356 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 TAS2R19P59542 299 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 MEP1BQ16820 701 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 TOR2AQ5JU69 321 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 GLYATL3Q5SZD4 288 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 PM20D1Q6GTS8 502 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 SFXN4Q6P4A7 337 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 CHFRQ96EP1 664 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 TRMT61AQ96FX7 289 aaKnown RBP11.71□□□□□ -0.53
USP38-201ENST00000307017 DYNLRB1Q9NP97 96 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 UFSP2Q9NUQ7 469 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 ZNF337Q9Y3M9 751 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 MYF5P13349 255 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 TAGLNQ01995 201 aaKnown RBP11.71□□□□□ -0.53
USP38-201ENST00000307017 CPZQ66K79 652 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 KCNRGQ8N5I3 272 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 ZNF417Q8TAU3 575 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 MSI2Q96DH6 328 aaKnown RBP11.71□□□□□ -0.53
USP38-201ENST00000307017 GPR173Q9NS66 373 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 MRPS28Q9Y2Q9 187 aaKnown RBP11.71□□□□□ -0.53
USP38-201ENST00000307017 ZNF281Q9Y2X9 895 aa11.71□□□□□ -0.53
USP38-201ENST00000307017 NME1P15531 152 aaKnown RBP11.71□□□□□ -0.54
USP38-201ENST00000307017 CSNK1DP48730 415 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 CDC34P49427 236 aaPredicted RBP11.71□□□□□ -0.54
USP38-201ENST00000307017 AVPI1Q5T686 147 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 PLXDC1Q8IUK5 500 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 SCML1Q9UN30 329 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 F2RP25116 425 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 TACR3P29371 465 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 RAD52P43351 418 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 MANEALQ5VSG8 457 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 L3MBTL4Q8NA19 623 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 ABHD4Q8TB40 342 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 C22orf15Q8WYQ4 148 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 ZNF597Q96LX8 424 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 PSD2Q9BQI7 771 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 TXLNGYQ9BZA5 131 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 SLC6A20Q9NP91 592 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 DCAF16Q9NXF7 216 aa11.71□□□□□ -0.54
USP38-201ENST00000307017 NPC1O15118 1278 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ADAM12O43184 909 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ZNF33AQ06730 810 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 FAM26DQ5JW98 314 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 UMODL1-AS1Q8N2C9 162 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 OR10Z1Q8NGY1 313 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 UBALD1Q8TB05 177 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 SLC38A5Q8WUX1 472 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 TXN2Q99757 166 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 CLMPQ9H6B4 373 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 SDR39U1Q9NRG7 319 aaPredicted RBP11.7□□□□□ -0.54
USP38-201ENST00000307017 LUZP4Q9P127 313 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ING1Q9UK53 422 aaPredicted RBP11.7□□□□□ -0.54
USP38-201ENST00000307017 PIGLQ9Y2B2 252 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 A0A0A6YYJ9 748 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 CYB5BO43169 146 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 AQP9O43315 295 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 CTNSO60931 367 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 NTSR1P30989 418 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ELAVL3Q14576 367 aaKnown RBP11.7□□□□□ -0.54
USP38-201ENST00000307017 LRRC28Q86X40 367 aaPredicted RBP11.7□□□□□ -0.54
USP38-201ENST00000307017 OR51D1Q8NGF3 324 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 CCDC74BQ96LY2 380 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ULBP2Q9BZM5 246 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ZNF286AQ9HBT8 521 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ATP13A2Q9NQ11 1180 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 CSAG2Q9Y5P2 127 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 SLIT3O75094 1523 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 OR2C1O95371 312 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 HNRNPA2B1P22626 353 aaKnown RBP11.7□□□□□ -0.54
USP38-201ENST00000307017 ETV1P50549 477 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 SPATS1Q496A3 300 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 NPSR1Q6W5P4 371 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 TM9SF4Q92544 642 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 HRASLS5Q96KN8 279 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 LPAR4Q99677 370 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 SLC22A23A1A5C7 686 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 LIPAP38571 399 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 UBE2G2P60604 165 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 RPP30P78346 268 aaKnown RBP11.7□□□□□ -0.54
USP38-201ENST00000307017 SLC16A14Q7RTX9 510 aa11.7□□□□□ -0.54
USP38-201ENST00000307017 ANKRD9Q96BM1 317 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms