RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 MEGF11A6BM72 1044 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 SLC22A1O15245 554 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 HNRNPCP07910 306 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 IDH3GP51553 393 aaPredicted RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 SQSTM1Q13501 440 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 COL25A1Q9BXS0 654 aaPredicted RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 ERVK-18Q9QC07 812 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 NDRG4Q9ULP0 352 aaKnown RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 A0A1B0GUH1 482 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 TCRBV16S1A1N1A0A5B0 115 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 LIFP15018 202 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 SRD5A2P31213 254 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 PROX2Q3B8N5 592 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 GJC3Q8NFK1 279 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 OR4C3Q8NH37 302 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 PFN4Q8NHR9 129 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 MMP25Q9NPA2 562 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 KCNJ16Q9NPI9 418 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 FAM53CQ9NYF3 392 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 SLC25A37Q9NYZ2 338 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 GMPR2Q9P2T1 348 aaKnown RBP8.44□□□□□ -1.06
PTPRE-202ENST00000306042 HHLA2Q9UM44 414 aa8.44□□□□□ -1.06
PTPRE-202ENST00000306042 M0R129 80 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 HTR3BO95264 441 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 HERV-K104P61576 105 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 VBP1P61758 197 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ARHGAP22Q7Z5H3 698 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 Q96M85 177 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 PHOX2BQ99453 314 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 WDR12Q9GZL7 423 aaKnown RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 EGLN1Q9GZT9 426 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 DCSTAMPQ9H295 470 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF701Q9NV72 531 aaPredicted RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 NDUFAF4Q9P032 175 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 NUFIP1Q9UHK0 495 aaKnown RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 FBXL3Q9UKT7 428 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 CROCCQ5TZA2 2017 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 CEP250Q9BV73 2442 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 A0A1W2PPH5 198 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 SERTM1A2A2V5 107 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 CLCA1A8K7I4 914 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 M0R1B8 84 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ATXN7O15265 892 aaPredicted RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 KIAA0513O60268 411 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 PIP5K1CO60331 668 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 MT-ND2P03891 347 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 GCNT2Q8N0V5 402 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF454Q8N9F8 522 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF350Q9GZX5 532 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 CST11Q9H112 138 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 DNTTIP1Q9H147 329 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 SLC22A11Q9NSA0 550 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 SPATA2Q9UM82 520 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 HRH3Q9Y5N1 445 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 TCF20Q9UGU0 1960 aaKnown RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 SMIM30A4D0T7 59 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 DOK2O60496 412 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 TIAL1Q01085 375 aaKnown RBP eCLIP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 KEAP1Q14145 624 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 OLFML2AQ68BL7 652 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 MOB3CQ70IA8 216 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ASRGL1Q7L266 308 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 STK35Q8TDR2 534 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ANKRD9Q96BM1 317 aaPredicted RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 SLC6A15Q9H2J7 730 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 QDPRP09417 244 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 RAB3AP20336 220 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 CHMP24386 653 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 ADH7P40394 386 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 RAB40BQ12829 278 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 CRMP1Q14194 572 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 RNPS1Q15287 305 aaKnown RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 MPEG1Q2M385 716 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 AWAT2Q6E213 333 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 MKXQ8IYA7 352 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 OR5D14Q8NGL3 314 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 RND1Q92730 232 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 EXTL1Q92935 676 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 SLC38A1Q9H2H9 487 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 GPN1Q9HCN4 374 aaPredicted RBP8.43□□□□□ -1.06
PTPRE-202ENST00000306042 LANCL2Q9NS86 450 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 OSGIN1Q9UJX0 560 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 NTNG1Q9Y2I2 539 aa8.43□□□□□ -1.06
PTPRE-202ENST00000306042 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ALG1L2C9J202 215 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 SGCEO43556 437 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 DHFRP00374 187 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 CT62P0C5K7 136 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ZNF16P17020 682 aaPredicted RBP8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ARRB2P32121 409 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 PTGER4P35408 488 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 MAMSTRQ6ZN01 415 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 DPY19L4Q7Z388 723 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 LINC00346Q8IVM7 164 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ARMC10Q8N2F6 343 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 FAM109AQ8N4B1 249 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 ABHD5Q8WTS1 349 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 RASD2Q96D21 266 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 GIMAP5Q96F15 307 aa8.42□□□□□ -1.06
PTPRE-202ENST00000306042 BARD1Q99728 777 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms