RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 TSPYL5Q86VY4 417 aaPredicted RBP23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 MICU2Q8IYU8 434 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 FBXL14Q8N1E6 418 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 SLC38A2Q96QD8 506 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 B3GAT2Q9NPZ5 323 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 ATP23Q9Y6H3 246 aa23.09■■□□□ 1.29
CDKN2A-201ENST00000304494 ACANP16112 2415 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 A0A096LPE4 126 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 A0A1W2PPZ6 126 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 TRIM64A6NGJ6 449 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 TRIM64BA6NI03 449 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 ZNF726A6NNF4 738 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 KPNA4O00629 521 aaPredicted RBP23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 CH25HO95992 272 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 FABP6P51161 128 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 CEACAM16Q2WEN9 425 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 C3orf36Q3SXR2 165 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 CYBRD1Q53TN4 286 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 C20orf196Q8IYI0 205 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 MUC15Q8N387 334 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 HOPXQ9BPY8 73 aaPredicted RBP23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 KCNS3Q9BQ31 491 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 CBLN4Q9NTU7 201 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 MED29Q9NX70 200 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 ZNF229Q9UJW7 825 aa23.08■■□□□ 1.29
CDKN2A-201ENST00000304494 CADP27708 2225 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 IGHV1-18A0A0C4DH31 117 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 SLC35F4A4IF30 521 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 ZNF99A8MXY4 864 aaPredicted RBP23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 M0R3G1 203 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 OR5F1O95221 314 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 HIST1H2ABP04908 130 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 TNFRSF1BP20333 461 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 CARD17Q5XLA6 110 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 NHLRC1Q6VVB1 395 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 B3GLCTQ6Y288 498 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 DEF8Q6ZN54 512 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 HIST3H2AQ7L7L0 130 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 CIARTQ8N365 385 aaPredicted RBP23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 FAM169BQ8N8A8 192 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 HIST1H2ACQ93077 130 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 SMR3AQ99954 134 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 PRSS27Q9BQR3 290 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 EMC6Q9BV81 110 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 KATNB1Q9BVA0 655 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 NELFAQ9H3P2 528 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 EFCAB1Q9HAE3 211 aa23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 BARX1Q9HBU1 254 aaPredicted RBP23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 CRNNQ9UBG3 495 aaPredicted RBP23.07■■□□□ 1.28
CDKN2A-201ENST00000304494 RBM34P42696 430 aaKnown RBP23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 ZP4Q12836 540 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 CLEC12BQ2HXU8 276 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 CLEC9AQ6UXN8 241 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 CCDC36Q8IYA8 594 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 LZICQ8WZA0 190 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 TXNDC15Q96J42 360 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 TPD52L3Q96J77 140 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 ADAD1Q96M93 576 aaKnown RBP23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 HS6ST2Q96MM7 605 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 ELAC2Q9BQ52 826 aaKnown RBP23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 CMTM6Q9NX76 183 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 RIMS3Q9UJD0 308 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 MOKQ9UQ07 419 aa23.06■■□□□ 1.28
CDKN2A-201ENST00000304494 C11orf98E9PRG8 122 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 ATP6V1G2-DDX39BF2Z307 99 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 SERPINI2O75830 405 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 CRYAAP02489 173 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 THRBP10828 461 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 UMPSP11172 480 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 OR1E2P47887 323 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 SELENOWP63302 87 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 C11orf71Q6IPW1 123 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 SLC15A3Q8IY34 581 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 OR6N1Q8NGY5 312 aa23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 ZNF837Q96EG3 531 aaPredicted RBP23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 NSRP1Q9H0G5 558 aaKnown RBP23.05■■□□□ 1.28
CDKN2A-201ENST00000304494 NF1P21359 2839 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 NDUFAB1O14561 156 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 RNF13O43567 381 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 IGF2P01344 180 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 MT-ND1P03886 318 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 ASAH2BP0C7U1 165 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 BMP4P12644 408 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 IFNGR1P15260 489 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 APOBEC3AP31941 199 aaPredicted RBP23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 TUBA1BP68363 451 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 TUBA4AP68366 448 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 LIPEQ05469 1076 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 PIN1Q13526 163 aaPredicted RBP23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 CAMK2DQ13557 499 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 PHYHD1Q5SRE7 291 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 HACD2Q6Y1H2 254 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 TUBA1AQ71U36 451 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 LRRC17Q8N6Y2 441 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 CMTM5Q96DZ9 223 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 CACNG6Q9BXT2 260 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 ULBP2Q9BZM5 246 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 MEPEQ9NQ76 525 aaPredicted RBP23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 TAS2R5Q9NYW4 299 aa23.04■■□□□ 1.28
CDKN2A-201ENST00000304494 SMAD7O15105 426 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms