RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF628Q5EBL2 1059 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 OR10K2Q6IF99 312 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 FBXO42Q6P3S6 717 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 KIRREL2Q6UWL6 708 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 PRSS42Q7Z5A4 293 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 ZNF680Q8NEM1 530 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 OR2T4Q8NH00 348 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 OR4C3Q8NH37 302 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 SLC22A8Q8TCC7 542 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 GIMAP5Q96F15 307 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 C20orf85Q9H1P6 137 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 DNAJC13O75165 2243 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 RAD52P43351 418 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 CEBPGP53567 150 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 LTBQ06643 244 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 TMEM201Q5SNT2 666 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 HEPHL1Q6MZM0 1159 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 TMEM65Q6PI78 240 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 BEST3Q8N1M1 668 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 TESQ9UGI8 421 aaKnown RBP12.89□□□□□ -0.35
SDC2-201ENST00000302190 LSM2Q9Y333 95 aaKnown RBP12.89□□□□□ -0.35
SDC2-201ENST00000302190 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
SDC2-201ENST00000302190 M0QYG6 137 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 CT62P0C5K7 136 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 MAPK3P27361 379 aaPredicted RBP12.89□□□□□ -0.35
SDC2-201ENST00000302190 BLKP51451 505 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 SORDQ00796 357 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 ZP2Q05996 745 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 FUT5Q11128 374 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 NFATC4Q14934 902 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 GLYR1Q49A26 553 aaPredicted RBP12.89□□□□□ -0.35
SDC2-201ENST00000302190 VASNQ6EMK4 673 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 TMEM184AQ6ZMB5 413 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 C3P1Q6ZMU1 363 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 LINC00518Q8N0U6 118 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 RFLNBQ8N5W9 214 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 ST8SIA4Q92187 359 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 PTP4A1Q93096 173 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 ACTR6Q9GZN1 396 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 PITHD1Q9GZP4 211 aaPredicted RBP12.89□□□□□ -0.35
SDC2-201ENST00000302190 ELOVL3Q9HB03 270 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 NRIP3Q9NQ35 241 aa12.89□□□□□ -0.35
SDC2-201ENST00000302190 CACNA1GO43497 2377 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 S1PR1P21453 382 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 PRSS3P35030 304 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 HTR4Q13639 388 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 MELKQ14680 651 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TMEM196Q5HYL7 178 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 ZCCHC12Q6PEW1 402 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 FAM198BQ6UWH4 519 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TMEM91Q6ZNR0 172 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 MED25Q71SY5 747 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 SSX6Q7RTT6 188 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TMEM151BQ8IW70 566 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 RCBTB1Q8NDN9 531 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 COPZ2Q9P299 210 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 MLXQ9UH92 298 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 ZNF281Q9Y2X9 895 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 COL4A4P53420 1690 aaPredicted RBP12.88□□□□□ -0.35
SDC2-201ENST00000302190 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 KANTRA0A1W2PQU2 76 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 WNT1P04628 370 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TPRA1Q86W33 373 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 ACBD4Q8NC06 268 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 MFFQ9GZY8 342 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 C19orf53Q9UNZ5 99 aaPredicted RBP12.88□□□□□ -0.35
SDC2-201ENST00000302190 NPIPA5E9PKD4 350 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 BET1O15155 118 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TRIM3O75382 744 aaPredicted RBP12.88□□□□□ -0.35
SDC2-201ENST00000302190 EGFP01133 1207 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 OR2T7P0C7T2 308 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TACR3P29371 465 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 OPCMLQ14982 345 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 MFSD13AQ14CX5 517 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 ZBTB37Q5TC79 503 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 METTL11BQ5VVY1 283 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 NKAIN2Q5VXU1 208 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 RAB12Q6IQ22 244 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 LINC00346Q8IVM7 164 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 SHISA5Q8N114 240 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TSTD1Q8NFU3 115 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 OR2T27Q8NH04 317 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 KIAA1143Q96AT1 154 aaPredicted RBP12.88□□□□□ -0.35
SDC2-201ENST00000302190 MRPL38Q96DV4 380 aaKnown RBP12.88□□□□□ -0.35
SDC2-201ENST00000302190 WDFY2Q96P53 400 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 KLRF1Q9NZS2 232 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 CLEC1BQ9P126 229 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 CGGBP1Q9UFW8 167 aaPredicted RBP12.88□□□□□ -0.35
SDC2-201ENST00000302190 NPIPA1Q9UND3 350 aa12.88□□□□□ -0.35
SDC2-201ENST00000302190 TP53BP1Q12888 1972 aaPredicted RBP12.87□□□□□ -0.35
SDC2-201ENST00000302190 A0A0J9YY10 115 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 A0A1W2PPL8 197 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 FITM1A5D6W6 292 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 HRKO00198 91 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 ATP1B1P05026 303 aa12.87□□□□□ -0.35
SDC2-201ENST00000302190 HTR2AP28223 471 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms