RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 GFYI3L273 518 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 MAN2B1O00754 1011 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 UBE2CO00762 179 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 CTNSO60931 367 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 ALOX12BO75342 701 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 CATP04040 527 aaKnown RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 RPN2P04844 631 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 SBK2P0C263 348 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 MAKP20794 623 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 PCP4P48539 62 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 ILF3Q12906 894 aaKnown RBP eCLIP13.22□□□□□ -0.29
CDT1-201ENST00000301019 RNF212Q495C1 297 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 C9orf64Q5T6V5 341 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 TMEM205Q6UW68 189 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 ARMC10Q8N2F6 343 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 SULT4A1Q9BR01 284 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 SMIM3Q9BZL3 60 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 CDV3Q9UKY7 258 aaKnown RBP13.22□□□□□ -0.29
CDT1-201ENST00000301019 NPFFR2Q9Y5X5 522 aa13.22□□□□□ -0.29
CDT1-201ENST00000301019 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 C2orf74A8MZ97 194 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 COCHO43405 550 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 BCL2L11O43521 198 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 TMPRSS11DO60235 418 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 IGSF6O95976 241 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 CD34P28906 385 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 IFNGR2P38484 337 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 C4orf17Q53FE4 359 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 MBOAT2Q6ZWT7 520 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 PHOSPHO2Q8TCD6 241 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 FOXN4Q96NZ1 517 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 C6orf106Q9H6K1 298 aaPredicted RBP13.21□□□□□ -0.29
CDT1-201ENST00000301019 SIRT3Q9NTG7 399 aaPredicted RBP13.21□□□□□ -0.29
CDT1-201ENST00000301019 EPHA6Q9UF33 1036 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 PADI3Q9ULW8 664 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 EXOGQ9Y2C4 368 aaKnown RBP13.21□□□□□ -0.29
CDT1-201ENST00000301019 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 H7BY64 318 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 SOX1O00570 391 aaPredicted RBP13.21□□□□□ -0.29
CDT1-201ENST00000301019 ARL6IP5O75915 188 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 QDPRP09417 244 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 FAM111BQ6SJ93 734 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 OR52E2Q8NGJ4 325 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 OR9A1PQ8NGU1 263 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 MAFIPQ8WZ33 124 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 SLC41A3Q96GZ6 507 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 PRAP1Q96NZ9 151 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 NRIP2Q9BQI9 281 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 NRSN2Q9GZP1 204 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 B4GALT6Q9UBX8 382 aa13.21□□□□□ -0.29
CDT1-201ENST00000301019 SNRPGP15A8MWD9 76 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TYRP14679 529 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 NT5EP21589 574 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TSFMP43897 325 aaKnown RBP13.2□□□□□ -0.3
CDT1-201ENST00000301019 GPR143P51810 404 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 ST3GAL3Q11203 375 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 HACD4Q5VWC8 232 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 LHX8Q68G74 356 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TXNDC8Q6A555 127 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 PWWP2BQ6NUJ5 590 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 GDF7Q7Z4P5 450 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TRAPPC5Q8IUR0 188 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 GPR148Q8TDV2 347 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 SLC25A43Q8WUT9 341 aaPredicted RBP13.2□□□□□ -0.3
CDT1-201ENST00000301019 TCF7L1Q9HCS4 588 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 APMAPQ9HDC9 416 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 KLF15Q9UIH9 416 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 SCN5AQ14524 2016 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 GGT3PA6NGU5 568 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 ACOT7O00154 380 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 DCTN6O00399 190 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TCAPO15273 167 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 RCC1P18754 421 aaPredicted RBP13.2□□□□□ -0.3
CDT1-201ENST00000301019 MRPS6P82932 125 aaKnown RBP13.2□□□□□ -0.3
CDT1-201ENST00000301019 FUT5Q11128 374 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 ELAVL2Q12926 359 aaKnown RBP13.2□□□□□ -0.3
CDT1-201ENST00000301019 SLC25A30Q5SVS4 291 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 C11orf87Q6NUJ2 197 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 CAMKMTQ7Z624 323 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 KRT77Q7Z794 578 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TMIEQ8NEW7 156 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 OR10AC1Q8NH08 325 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 ZNRF4Q8WWF5 429 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 PMM1Q92871 262 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 FATE1Q969F0 183 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 SLC22A12Q96S37 553 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 A4GALTQ9NPC4 353 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TMEM82A0PJX8 343 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 MED6O75586 246 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 ADH1AP07327 375 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 SPI1P17947 270 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 NRG3P56975 720 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 KIAA0141Q14154 515 aaPredicted RBP13.2□□□□□ -0.3
CDT1-201ENST00000301019 ZNF585AQ6P3V2 769 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 TMEM220Q6QAJ8 160 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 RNF165Q6ZSG1 346 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
CDT1-201ENST00000301019 PXKQ7Z7A4 578 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms