RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GPR171O14626 319 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 TOR1AO14656 332 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 CHP2O43745 196 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 PAPLNO95428 1278 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 CXCL10P02778 98 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 ADPRHP54922 357 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 DPTQ07507 201 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 AGBL4Q5VU57 503 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 NHLRC1Q6VVB1 395 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 OR5M1Q8NGP8 315 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 GSX2Q9BZM3 304 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 ALKBH4Q9NXW9 302 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 TESQ9UGI8 421 aaKnown RBP12.21□□□□□ -0.45
CASC4-201ENST00000299957 EMC9Q9Y3B6 208 aa12.21□□□□□ -0.45
CASC4-201ENST00000299957 F5H5K5 113 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 HPXP02790 462 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 RAF1P04049 648 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 EPXP11678 715 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 TMEM52BQ4KMG9 183 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 OR5T2Q8NGG2 359 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 GPR119Q8TDV5 335 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 TOMM40LQ969M1 308 aa12.21□□□□□ -0.46
CASC4-201ENST00000299957 A0A0J9YY10 115 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 TMEM269A0A1B0GVZ9 245 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 SHISA3A0PJX4 238 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 G3V3Y1 287 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 FBXO24O75426 580 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 EGFP01133 1207 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 CT62P0C5K7 136 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 FOXL2P58012 376 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 POU3F1Q03052 451 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 EEF1A2Q05639 463 aaKnown RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 GLYR1Q49A26 553 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 AADACL4Q5VUY2 407 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 PLPP6Q8IY26 295 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 PTP4A1Q93096 173 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 PELI1Q96FA3 418 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 SENP5Q96HI0 755 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 OR10A5Q9H207 317 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 KIR3DX1Q9H7L2 352 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 MED17Q9NVC6 651 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 TMEM14AQ9Y6G1 99 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 NYNRINQ9P2P1 1898 aaKnown RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 SERINC4A6NH21 518 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 HRKO00198 91 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 HOXB5P09067 269 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 SPI1P17947 270 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 DRD3P35462 400 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 IL13RA1P78552 427 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 NFATC4Q14934 902 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 LINC00303Q3SY05 128 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 ZNF628Q5EBL2 1059 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 SFRP5Q5T4F7 317 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 B3GNTL1Q67FW5 361 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 AWAT2Q6E213 333 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 SLC18B1Q6NT16 456 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 MAMSTRQ6ZN01 415 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 TMEM17Q86X19 198 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 GLB1L2Q8IW92 636 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 SPAG16Q8N0X2 631 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 ZNF337Q9Y3M9 751 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 ERVH48-1M5A8F1 160 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 AK1P00568 194 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 DLSTP36957 453 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 PRPS1P60891 318 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 TEKQ02763 1124 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 CBFBQ13951 182 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 PHF19Q5T6S3 580 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 FBXO42Q6P3S6 717 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 TMEM91Q6ZNR0 172 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 ZBTB44Q8NCP5 570 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 FCRL1Q96LA6 429 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 C7orf50Q9BRJ6 194 aaKnown RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 SELENOIQ9C0D9 397 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 NXF5Q9H1B4 397 aaKnown RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 HRASLSQ9HDD0 168 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 CYSLTR2Q9NS75 346 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 CAMK2AQ9UQM7 478 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 ARHGEF17Q96PE2 2063 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 TMEM235A6NFC5 223 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 FAM69AQ5T7M9 428 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 ZNF770Q6IQ21 691 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 VN1R4Q7Z5H5 301 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 OR51Q1Q8NH59 317 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 HAVCR2Q8TDQ0 301 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 HRH4Q9H3N8 390 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 C19orf53Q9UNZ5 99 aaPredicted RBP12.2□□□□□ -0.46
CASC4-201ENST00000299957 TRAPPC4Q9Y296 219 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 RHBDD3Q9Y3P4 386 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 AKAP6Q13023 2319 aa12.2□□□□□ -0.46
CASC4-201ENST00000299957 MDC1Q14676 2089 aaKnown RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 A0A0A6YYH2 397 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 A6NJ64 397 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 ATP6V1G2-DDX39BF2Z307 99 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 CCR9P51686 369 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 LUMP51884 338 aaPredicted RBP12.19□□□□□ -0.46
CASC4-201ENST00000299957 TLE3Q04726 772 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
CASC4-201ENST00000299957 TSSK4Q6SA08 328 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms