RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SLC3A1Q07837 685 aa23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 LGALS3BPQ08380 585 aa23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 POU4F2Q12837 409 aa23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 ETFDHQ16134 617 aa23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 C16orf87Q6PH81 154 aa23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 OPN5Q6U736 354 aa23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 PPIL3Q9H2H8 161 aaKnown RBP23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 ING1Q9UK53 422 aaPredicted RBP23.09■■□□□ 1.29
SDCCAG3-201ENST00000298537 A0A1W2PNR3 127 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 A0A1W2PQ72 361 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 TP53I11O14683 189 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 IFITM3Q01628 133 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 FADS6Q8N9I5 356 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 POMGNT2Q8NAT1 580 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 DEFB124Q8NES8 71 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 OR13C5Q8NGS8 318 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 ZNF519Q8TB69 540 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 WDR76Q9H967 626 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 SDHAF3Q9NRP4 125 aa23.08■■□□□ 1.29
SDCCAG3-201ENST00000298537 AKR7A3O95154 331 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 OR2T7P0C7T2 308 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 DLSTP36957 453 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 SLC25A1P53007 311 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 DLX5P56178 289 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 SSPNQ14714 243 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 SLC35D3Q5M8T2 416 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 FAM27D1Q5T7N8 215 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 LCN1P1Q5VSP4 162 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 OR4K17Q8NGC6 315 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 OR2T27Q8NH04 317 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 JSRP1Q96MG2 331 aaPredicted RBP23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 TRIM36Q9NQ86 728 aa23.08■■□□□ 1.28
SDCCAG3-201ENST00000298537 A0A087WV48 116 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 A0A0G2JMM0 328 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 LOC101059948A0A1B0GTJ6 334 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 A0A1W2PPB8 328 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 A0A1W2PRS3 328 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 KIR3DP1A8MWS1 328 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 TNFSF15O95150 251 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 OR6A2O95222 327 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 KLK2P20151 261 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 MSX1P28360 303 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 PSMB10P40306 273 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 RPL27P61353 136 aaKnown RBP23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 TCF15Q12870 199 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 DNASE1L3Q13609 305 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 ZNF846Q147U1 533 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 PELI1Q96FA3 418 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 CPNE5Q9HCH3 593 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 SH2D2AQ9NP31 389 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 ACOXLQ9NUZ1 547 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 MRPL39Q9NYK5 338 aaKnown RBP23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 NCDNQ9UBB6 729 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 TRDV1A0A1B0GX56 115 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 OR2T1O43869 369 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 NCR1O76036 304 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 RAB40ALP0C0E4 278 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 RPS15P62841 145 aaKnown RBP23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 ACTC1P68032 377 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 ACTA1P68133 377 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 MYBPHQ13203 477 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 EMC4Q5J8M3 183 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 MRGPRX4Q96LA9 322 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 KCTD7Q96MP8 289 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 TSPAN10Q9H1Z9 355 aaPredicted RBP23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 HMG20AQ9NP66 347 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 PCDHGB6Q9Y5F9 930 aa23.07■■□□□ 1.28
SDCCAG3-201ENST00000298537 HNRNPA0Q13151 305 aaKnown RBP23.06■■□□□ 1.28
SDCCAG3-201ENST00000298537 SLC25A53Q5H9E4 307 aa23.06■■□□□ 1.28
SDCCAG3-201ENST00000298537 GPR139Q6DWJ6 353 aa23.06■■□□□ 1.28
SDCCAG3-201ENST00000298537 FRMD6Q96NE9 622 aa23.06■■□□□ 1.28
SDCCAG3-201ENST00000298537 HPF1Q9NWY4 346 aa23.06■■□□□ 1.28
SDCCAG3-201ENST00000298537 GNG8Q9UK08 70 aa23.06■■□□□ 1.28
SDCCAG3-201ENST00000298537 ZFHX4Q86UP3 3567 aa23.06■■□□□ 1.28
SDCCAG3-201ENST00000298537 hCG_2014768A0A024R1R8 64 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 SPAARA0A1B0GVQ0 90 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 IGHEP01854 428 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 SFTPDP35247 375 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 TIGD4Q8IY51 512 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 PAQR8Q8TEZ7 354 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 DDIT4LQ96D03 193 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 TXNDC15Q96J42 360 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 PGLYRP3Q96LB9 341 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 TXNIPQ9H3M7 391 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 MED29Q9NX70 200 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 ST6GALNAC2Q9UJ37 374 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 NOX1Q9Y5S8 564 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 DOCK10Q96BY6 2186 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 LIPT2A6NK58 231 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 SOX6P35712 828 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 BDH1Q02338 343 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 PUDPQ08623 228 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 CSRP2Q16527 193 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.05■■□□□ 1.288e-7■■■□□ 14.6
SDCCAG3-201ENST00000298537 PIP4P1Q86T03 277 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 MFSD8Q8NHS3 518 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 SNX33Q8WV41 574 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 NXPE2Q96DL1 559 aa23.05■■□□□ 1.28
SDCCAG3-201ENST00000298537 IL17BQ9UHF5 180 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms