RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 CTSFQ9UBX1 484 aa6.08□□□□□ -1.44
TMC1-201ENST00000297784 DUX4Q9UBX2 424 aa6.08□□□□□ -1.44
TMC1-201ENST00000297784 DTX4Q9Y2E6 619 aa6.08□□□□□ -1.44
TMC1-201ENST00000297784 CHST2Q9Y4C5 530 aa6.08□□□□□ -1.44
TMC1-201ENST00000297784 RIF1Q5UIP0 2472 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 FAM74A7A6NL05 159 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 OR10H3O60404 316 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 RP2O75695 350 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SC5DO75845 299 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 RGS9O75916 674 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 RGS11O94810 467 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 UBL3O95164 117 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 HPP00738 406 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 HPXP02790 462 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 H1F0P07305 194 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 FGF5P12034 268 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 GABRA1P14867 456 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 MAPK3P27361 379 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 RPL35P42766 123 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 SLC1A3P43003 542 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 GIPRP48546 466 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SRP9P49458 86 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 PITPNAQ00169 270 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 FOXD4Q12950 439 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 KLF9Q13886 244 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 EXOSC7Q15024 291 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 TMEM44Q2T9K0 475 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 FAM74A3Q4VXF1 159 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 FAM209BQ5JX69 171 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ELFN2Q5R3F8 820 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 IDNKQ5T6J7 187 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 RAB11FIP2Q7L804 512 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ZER1Q7Z7L7 766 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 PIP4P1Q86T03 277 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 NR2C2APQ86WQ0 139 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ZNF595Q8IYB9 648 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ZNF454Q8N9F8 522 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 OR5M9Q8NGP3 310 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SFXN5Q8TD22 340 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 PTPMT1Q8WUK0 201 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 HOXB13Q92826 284 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 INTS12Q96CB8 462 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 ORAI1Q96D31 301 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SLC35A4Q96G79 324 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SEC22CQ9BRL7 303 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ZNF649Q9BS31 505 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 NDC1Q9BTX1 674 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 A4GALTQ9NPC4 353 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 TMEM9BQ9NQ34 198 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 GPR160Q9UJ42 338 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 FBXL2Q9UKC9 423 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 FBXL3Q9UKT7 428 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SPATA2Q9UM82 520 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 C19orf53Q9UNZ5 99 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 IGLV3-12A0A075B6K2 115 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 TCRBV16S1A1N1A0A5B0 115 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ANXA2P2A6NMY6 339 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 EFCAB7A8K855 629 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 EMC8O43402 210 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SCRG1O75711 98 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 EPPINO95925 133 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ONECUT2O95948 504 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 PLATP00750 562 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 TFP02787 698 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ALDOBP05062 364 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 CD53P19397 219 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 S100A11P31949 105 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 MTNR1AP48039 350 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 EMDP50402 254 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SMSP52788 366 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 HSD17B7P56937 341 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ACY1Q03154 408 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 GINS1Q14691 196 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ENTPD8Q5MY95 495 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 FAM69AQ5T7M9 428 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 CDCP2Q5VXM1 449 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 TPRA1Q86W33 373 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ZNF321PQ8N8H1 164 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 ZNF527Q8NB42 609 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 COQ8AQ8NI60 647 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 CNOT9Q92600 299 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 TSLPQ969D9 159 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 LRRC46Q96FV0 321 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 TMED9Q9BVK6 235 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 NKX6-2Q9C056 277 aaPredicted RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 C20orf85Q9H1P6 137 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 SLC25A32Q9H2D1 315 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 BABAM2Q9NXR7 383 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 RHCGQ9UBD6 479 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 EXOGQ9Y2C4 368 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 PCDHGA9Q9Y5G4 932 aaKnown RBP6.07□□□□□ -1.44
TMC1-201ENST00000297784 SDK2Q58EX2 2172 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 PTPRBP23467 1997 aa6.07□□□□□ -1.44
TMC1-201ENST00000297784 A0A087WV62 115 aa6.06□□□□□ -1.44
TMC1-201ENST00000297784 HNRNPCL2B2RXH8 293 aa6.06□□□□□ -1.44
TMC1-201ENST00000297784 SUSD5O60279 629 aa6.06□□□□□ -1.44
TMC1-201ENST00000297784 FCMRO60667 390 aa6.06□□□□□ -1.44
TMC1-201ENST00000297784 SEMA7AO75326 666 aa6.06□□□□□ -1.44
TMC1-201ENST00000297784 IGHA1P01876 353 aa6.06□□□□□ -1.44
TMC1-201ENST00000297784 BCHEP06276 602 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms