RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 NR4A3Q92570 626 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 MRPL38Q96DV4 380 aaKnown RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 MS4A8Q9BY19 250 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 CALML5Q9NZT1 146 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 PLEKHM1Q9Y4G2 1056 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TUBAL3A6NHL2 446 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 H7C1C5 153 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 EMC8O43402 210 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 PRSS3P35030 304 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 BSGP35613 385 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 LSSP48449 732 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 LCN6P62502 163 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 RPS27AP62979 156 aaKnown RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 UBA52P62987 128 aaKnown RBP13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TANGO2Q6ICL3 276 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TMIEQ8NEW7 156 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 PELI1Q96FA3 418 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 LRRC3BQ96PB8 259 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 MS4A4EQ96PG1 132 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 SPSB2Q99619 263 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 SLC38A1Q9H2H9 487 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 EPPINO95925 133 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 METAP1P53582 386 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 S100A10P60903 97 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 CTAG1AP78358 180 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 TMEM215Q68D42 235 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 BAIAP2L2Q6UXY1 529 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 NUBPLQ8TB37 319 aa13.64□□□□□ -0.23
SPIDR-201ENST00000297423 A0A087WV48 116 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 EDDM13A0A1B0GTR0 161 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 TMEM72A0PK05 275 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 TRAPPC13A5PLN9 417 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 NPIPB8E9PQR5 432 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 PEX12O00623 359 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 WASP42768 502 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 PTGFRP43088 359 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 RUNX3Q13761 415 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 TGIF1Q15583 401 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 CDNFQ49AH0 187 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 ACOT4Q8N9L9 421 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 OR6N2Q8NGY6 317 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 APOBEC4Q8WW27 367 aaKnown RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 DIO2Q92813 273 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 SLC35A3Q9Y2D2 325 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 KIAA1671Q9BY89 1806 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 TMEM82A0PJX8 343 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 DCDC2BA2VCK2 349 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 C1QTNF3-AMACRE9PGA6 284 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 MAN2B1O00754 1011 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 PLPP2O43688 288 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 IGHA1P01876 353 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 F3P13726 295 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 CCKBRP32239 447 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 PRLHRP49683 370 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF85Q03923 595 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 MRPL2Q5T653 305 aaKnown RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 C12orf40Q86WS4 652 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF227Q86WZ6 799 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 VN1R2Q8NFZ6 395 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 ARL11Q969Q4 196 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 RSPRY1Q96DX4 576 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 CNRIP1Q96F85 164 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 GPN3Q9UHW5 284 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 A0A0G2JK05 382 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 CENPVL1A0A0U1RR11 272 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 G3V3Q6 166 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 APODP05090 189 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 TIMP2P16035 220 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 NQO2P16083 231 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 NPBWR1P48145 328 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 HENMT1Q5T8I9 393 aaKnown RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 FAM122BQ7Z309 247 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 FAM71CQ8NEG0 241 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 CD300LFQ8TDQ1 290 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 RXFP4Q8TDU9 374 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 LMLNQ96KR4 655 aa13.63□□□□□ -0.23
SPIDR-201ENST00000297423 POLMQ9NP87 494 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF443Q9Y2A4 671 aaPredicted RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 EXOGQ9Y2C4 368 aaKnown RBP13.63□□□□□ -0.23
SPIDR-201ENST00000297423 FITM1A5D6W6 292 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 NDUFA2O43678 99 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 NDUFB6O95139 128 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 SNAPINO95295 136 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 IFNA6P05013 189 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 CD2P06729 351 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 AVPR2P30518 371 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 AGTR1P30556 359 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 MAT1AQ00266 395 aaKnown RBP13.62□□□□□ -0.23
SPIDR-201ENST00000297423 DUSP2Q05923 314 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 OR10K2Q6IF99 312 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 LNX2Q8N448 690 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 ISOC2Q96AB3 205 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 MRPL48Q96GC5 212 aaKnown RBP13.62□□□□□ -0.23
SPIDR-201ENST00000297423 SLC27A6Q9Y2P4 619 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 AIFM1O95831 613 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 DAOP14920 347 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 PNPLA2Q96AD5 504 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 LYSMD1Q96S90 227 aa13.62□□□□□ -0.23
SPIDR-201ENST00000297423 CMKLR1Q99788 373 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms