RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 AGAP4Q96P64 663 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 NECAB3Q96P71 396 aaPredicted RBP8.46□□□□□ -1.06
PRDM9-201ENST00000296682 DEFB126Q9BYW3 111 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 NUDT15Q9NV35 164 aa8.46□□□□□ -1.06
PRDM9-201ENST00000296682 TMED7-TICAM2A0A0A6YYA0 188 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF593O00488 134 aaPredicted RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 SSNA1O43805 119 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 PTP4A3O75365 173 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ARL6IP5O75915 188 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 MT-ND4P03905 459 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 SYPP08247 313 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 APEHP13798 732 aaKnown RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF823P16415 610 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 KIR2DL3P43628 341 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 PRPS1P60891 318 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 POU3F1Q03052 451 aaPredicted RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 C9orf40Q8IXQ3 194 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 UBQLNLQ8IYU4 475 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 DEFB123Q8N688 67 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF417Q8TAU3 575 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 RFT1Q96AA3 541 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF587Q96SQ5 575 aaPredicted RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 KCNG2Q9UJ96 466 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 SLC22A13Q9Y226 551 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 TMED7Q9Y3B3 224 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 FKBP7Q9Y680 259 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 A0A1W2PNR3 127 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 LILRA5A6NI73 299 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 LANCL1O43813 399 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 LYPD3O95274 346 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 CCR6P51684 374 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 BLVRAP53004 296 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ACTC1P68032 377 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ACTA1P68133 377 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 FOXK1P85037 733 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 FUT7Q11130 342 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 HLA-BQ31612 363 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 DPY19L2P2Q6ZN68 376 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 NR2C2APQ86WQ0 139 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 LGALS14Q8TCE9 139 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 LMF2Q9BU23 707 aaKnown RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 LAMTOR5O43504 91 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 AKR7A3O95154 331 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 OR2T7P0C7T2 308 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 PNMTP11086 282 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 IL11P20809 199 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 GIFP27352 417 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 EVX1P49640 407 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 GALK2Q01415 458 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 TAF13Q15543 124 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ACKR1Q16570 336 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 NTRK2Q16620 822 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM225Q6GV28 225 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 CHMP1BQ7LBR1 199 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 OR6V1Q8N148 313 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 JAGN1Q8N5M9 183 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 GDPD1Q8N9F7 314 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 OR2T4Q8NH00 348 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 OR2T27Q8NH04 317 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 OR10AC1Q8NH08 325 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 OR5AK2Q8NH90 309 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 NXPE2Q96DL1 559 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 MRPL48Q96GC5 212 aaKnown RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ARL5BQ96KC2 179 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 NPAS1Q99742 590 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 SOSTQ9BQB4 213 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 WWTR1Q9GZV5 400 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 DUSP15Q9H1R2 295 aaPredicted RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 RNF121Q9H920 327 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ELOVL3Q9HB03 270 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 MMP25Q9NPA2 562 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 PLSCR3Q9NRY6 295 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 GPN3Q9UHW5 284 aaPredicted RBP8.45□□□□□ -1.06
PRDM9-201ENST00000296682 ZMIZ1Q9ULJ6 1067 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 NPFFR2Q9Y5X5 522 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 DNAJC13O75165 2243 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 FREM3P0C091 2139 aa8.45□□□□□ -1.06
PRDM9-201ENST00000296682 NPIPA5E9PKD4 350 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 ZFPL1O95159 310 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 RLN1P04808 185 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 HLA-DOBP13765 273 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 RFX2P48378 723 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 DIO1P49895 249 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 LTBQ06643 244 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 FMODQ06828 376 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 FZD5Q13467 585 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 EBPQ15125 230 aaKnown RBP8.44□□□□□ -1.06
PRDM9-201ENST00000296682 ANGPT1Q15389 498 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 ZNF74Q16587 644 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 ARSKQ6UWY0 536 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 NUP54Q7Z3B4 507 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 MS4A15Q8N5U1 240 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 TMEM156Q8N614 296 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 NPEPL1Q8NDH3 523 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 LANCL2Q9NS86 450 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 PPP4R1LQ9P1A2 415 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 NPIPA1Q9UND3 350 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 KIF26BQ2KJY2 2108 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 A0A1W2PPL8 197 aa8.44□□□□□ -1.06
PRDM9-201ENST00000296682 NUDT21O43809 227 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms