RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 EXD3Q8N9H8 876 aa12.68□□□□□ -0.38
NXF1-201ENST00000294172 SCAIQ8N9R8 606 aa12.68□□□□□ -0.38
NXF1-201ENST00000294172 OR4M2Q8NGB6 313 aa12.68□□□□□ -0.38
NXF1-201ENST00000294172 TRMT10AQ8TBZ6 339 aaKnown RBP12.68□□□□□ -0.38
NXF1-201ENST00000294172 C8orf44Q96CB5 159 aa12.68□□□□□ -0.38
NXF1-201ENST00000294172 TTYH2Q9BSA4 534 aa12.68□□□□□ -0.38
NXF1-201ENST00000294172 PTDSS2Q9BVG9 487 aa12.68□□□□□ -0.38
NXF1-201ENST00000294172 CACNA1CQ13936 2221 aa12.68□□□□□ -0.38
NXF1-201ENST00000294172 COL5A1P20908 1838 aaPredicted RBP12.67□□□□□ -0.38
NXF1-201ENST00000294172 CCDC163A0A0D9SF12 145 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 XKRYO14609 159 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 ARL6IP5O75915 188 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 CCDC58Q4VC31 144 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 OTPQ5XKR4 325 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 GPR139Q6DWJ6 353 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 ZNF544Q6NX49 715 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 NUP54Q7Z3B4 507 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 GRINAQ7Z429 371 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 PPP1R3BQ86XI6 285 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 DEFB123Q8N688 67 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 TEX19Q8NA77 164 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 NFAM1Q8NET5 270 aaPredicted RBP12.67□□□□□ -0.38
NXF1-201ENST00000294172 OR4M1Q8NGD0 313 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 OR6N2Q8NGY6 317 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 CHAC2Q8WUX2 184 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 KCTD12Q96CX2 325 aaKnown RBP12.67□□□□□ -0.38
NXF1-201ENST00000294172 ORAI1Q96D31 301 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 SEMA4CQ9C0C4 833 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 GALNT9Q9HCQ5 603 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 OCIAD1Q9NX40 245 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 A0A0B4J203 849 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 FLRT2O43155 660 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 SEC14L5O43304 696 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 GDF9O60383 454 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 KRT8P05787 483 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 MAGEB1P43366 347 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 CENPAP49450 140 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 NANOS3P60323 173 aaKnown RBP12.67□□□□□ -0.38
NXF1-201ENST00000294172 FAM69AQ5T7M9 428 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 LCN10Q6JVE6 187 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 OVCH1Q7RTY7 1134 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
NXF1-201ENST00000294172 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
NXF1-201ENST00000294172 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 ENKURQ8TC29 256 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 HSD17B8Q92506 261 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 FOXN4Q96NZ1 517 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 IER2Q9BTL4 223 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 WDR76Q9H967 626 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 CYSLTR2Q9NS75 346 aa12.67□□□□□ -0.38
NXF1-201ENST00000294172 AK6Q9Y3D8 172 aaKnown RBP12.67□□□□□ -0.38
NXF1-201ENST00000294172 A0A087WV48 116 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 A8MVM7 634 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 PATE3B3GLJ2 98 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 OR6A2O95222 327 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 HOXA6P31267 233 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 HTR3AP46098 478 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 SLC26A5P58743 744 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 EFR3AQ14156 821 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 FAM69BQ5VUD6 431 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 FAM220AQ7Z4H9 259 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 WDR5BQ86VZ2 330 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 IFI44Q8TCB0 444 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 CAPSLQ8WWF8 208 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 CRB3Q9BUF7 120 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 HDHD2Q9H0R4 259 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 NEK6Q9HC98 313 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 LAMP5Q9UJQ1 280 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 IKZF2Q9UKS7 526 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 TRAV1-2A0A0B4J238 106 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 C19orf67A6NJJ6 358 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 ACOD1A6NK06 481 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 GATBO75879 557 aaKnown RBP12.66□□□□□ -0.38
NXF1-201ENST00000294172 AKR7A3O95154 331 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 ZFPL1O95159 310 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 MT-ATP6P00846 226 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 HLA-DQA2P01906 255 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 TACSTD2P09758 323 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 GSTT2P0CG29 244 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 GSTT2BP0CG30 244 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 PTBP1P26599 531 aaKnown RBP eCLIP12.66□□□□□ -0.383e-7■■■■■ 65.2
NXF1-201ENST00000294172 HOXD12P35452 270 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 KIR2DL3P43628 341 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 ACKR1Q16570 336 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 SGCBQ16585 318 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 ZNF57Q68EA5 555 aaPredicted RBP12.66□□□□□ -0.38
NXF1-201ENST00000294172 BICRALQ6AI39 1079 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 DPY19L4Q7Z388 723 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 THEM6Q8WUY1 208 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 NAT6Q93015 286 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 NPAS1Q99742 590 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 AKIRIN1Q9H9L7 192 aaPredicted RBP12.66□□□□□ -0.38
NXF1-201ENST00000294172 NOX4Q9NPH5 578 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 BRD7Q9NPI1 651 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 NPAP1Q9NZP6 1156 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 MED11Q9P086 117 aa12.66□□□□□ -0.38
NXF1-201ENST00000294172 MRM2Q9UI43 246 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms