RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 CRNNQ9UBG3 495 aaPredicted RBP8.3□□□□□ -1.08
HMHB1-201ENST00000289448 TESQ9UGI8 421 aaKnown RBP8.3□□□□□ -1.08
HMHB1-201ENST00000289448 RCE1Q9Y256 329 aa8.3□□□□□ -1.08
HMHB1-201ENST00000289448 CAPN7Q9Y6W3 813 aa8.3□□□□□ -1.08
HMHB1-201ENST00000289448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.29□□□□□ -1.08
HMHB1-201ENST00000289448 PRORSD1PA6NEY8 169 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 EVPLLA8MZ36 301 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 H0YHG0 523 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 RPL36A-HNRNPH2H7BZ11 118 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 CD5LO43866 347 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 OR2T1O43869 369 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 SLC43A1O75387 559 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 LYPD3O95274 346 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 OPN1SWP03999 348 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 THY1P04216 161 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 T-ENOLP0DO92 83 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 GTF2E2P29084 291 aaKnown RBP8.29□□□□□ -1.08
HMHB1-201ENST00000289448 GZMMP51124 257 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 CRYBA2P53672 197 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 RGS8P57771 180 aaPredicted RBP8.29□□□□□ -1.08
HMHB1-201ENST00000289448 UBE2NP61088 152 aaKnown RBP8.29□□□□□ -1.08
HMHB1-201ENST00000289448 NAAAQ02083 359 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 HGFACQ04756 655 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 C1DQ13901 141 aaKnown RBP8.29□□□□□ -1.08
HMHB1-201ENST00000289448 CEACAM16Q2WEN9 425 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 HMBOX1Q6NT76 420 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 CLEC2AQ6UVW9 174 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 WDR88Q6ZMY6 472 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 DHDDSQ86SQ9 333 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 RBM45Q8IUH3 476 aaKnown RBP8.29□□□□□ -1.08
HMHB1-201ENST00000289448 DPP10Q8N608 796 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 ADPRHL1Q8NDY3 354 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 OR4D11Q8NGI4 311 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 RNF217Q8TC41 542 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 FBXO17Q96EF6 278 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 SLC47A1Q96FL8 570 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 TXNDC15Q96J42 360 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 CGREF1Q99674 301 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 ARHGDIGQ99819 225 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 EMC6Q9BV81 110 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 KATNB1Q9BVA0 655 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 TMEM27Q9HBJ8 222 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 CRLF2Q9HC73 371 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 YAE1D1Q9NRH1 226 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 ARL8BQ9NVJ2 186 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 ARMCX1Q9P291 453 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 TAGLN3Q9UI15 199 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 LEF1Q9UJU2 399 aaPredicted RBP8.29□□□□□ -1.08
HMHB1-201ENST00000289448 CORO2BQ9UQ03 480 aa8.29□□□□□ -1.08
HMHB1-201ENST00000289448 M0QX08 132 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 M0R3G1 203 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 FBP2O00757 339 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 PLPP3O14495 311 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 SERPINB7O75635 380 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 SEC14L2O76054 403 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 IGKV3-15P01624 115 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 CD247P20963 164 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 PRDX6P30041 224 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 SERPINF1P36955 418 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 MNAT1P51948 309 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 EFNA4P52798 201 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 IL1RL1Q01638 556 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 CHRNB3Q05901 458 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 ADIPOQQ15848 244 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 C3orf36Q3SXR2 165 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 CARD17Q5XLA6 110 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 C5orf46Q6UWT4 87 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 LINC00114Q6XXX2 140 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 ASRGL1Q7L266 308 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 NET1Q7Z628 596 aaPredicted RBP8.28□□□□□ -1.08
HMHB1-201ENST00000289448 TREML1Q86YW5 311 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 C20orf196Q8IYI0 205 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 C11orf65Q8NCR3 313 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 ANKK1Q8NFD2 765 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 OR6T1Q8NGN1 323 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 OR6S1Q8NH40 331 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 C10orf105Q8TEF2 133 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 SORCS2Q96PQ0 1159 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 RAB3IPQ96QF0 476 aaPredicted RBP8.28□□□□□ -1.08
HMHB1-201ENST00000289448 TNFRSF13CQ96RJ3 184 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 MCHR1Q99705 422 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 TMEM43Q9BTV4 400 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 KAT8Q9H7Z6 458 aaKnown RBP8.28□□□□□ -1.08
HMHB1-201ENST00000289448 NOX3Q9HBY0 568 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 CA10Q9NS85 328 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 MED29Q9NX70 200 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 ANGPT4Q9Y264 503 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 NDUFAF1Q9Y375 327 aa8.28□□□□□ -1.08
HMHB1-201ENST00000289448 CHD3Q12873 2000 aaKnown RBP8.28□□□□□ -1.08
HMHB1-201ENST00000289448 MALRD1Q5VYJ5 2156 aa8.27□□□□□ -1.09
HMHB1-201ENST00000289448 IGHV2OR16-5A0A0B4J2B6 119 aa8.27□□□□□ -1.09
HMHB1-201ENST00000289448 SLC35F4A4IF30 521 aa8.27□□□□□ -1.09
HMHB1-201ENST00000289448 CPSF4LA6NMK7 179 aaKnown RBP8.27□□□□□ -1.09
HMHB1-201ENST00000289448 ZNF99A8MXY4 864 aaPredicted RBP8.27□□□□□ -1.09
HMHB1-201ENST00000289448 TLX2O43763 284 aaPredicted RBP8.27□□□□□ -1.09
HMHB1-201ENST00000289448 FMO6PO60774 539 aa8.27□□□□□ -1.09
HMHB1-201ENST00000289448 F12P00748 615 aaPredicted RBP8.27□□□□□ -1.09
HMHB1-201ENST00000289448 HLA-HP01893 362 aa8.27□□□□□ -1.09
HMHB1-201ENST00000289448 CRYAAP02489 173 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms