RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 RFLNBQ8N5W9 214 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 DTX3Q8N9I9 347 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 OR4D9Q8NGE8 314 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 SMAP2Q8WU79 429 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-201ENST00000277198 RAB40AQ8WXH6 277 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 OR14A2Q96R54 314 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 TCEAL2Q9H3H9 227 aaPredicted RBP11.78□□□□□ -0.52
C9orf3-201ENST00000277198 SEMA6CQ9H3T2 930 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 GPR27Q9NS67 375 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 SLC6A5Q9Y345 797 aa11.78□□□□□ -0.52
C9orf3-201ENST00000277198 AK6Q9Y3D8 172 aaKnown RBP11.78□□□□□ -0.52
C9orf3-201ENST00000277198 MAP1BP46821 2468 aaKnown RBP11.77□□□□□ -0.52
C9orf3-201ENST00000277198 GOLGA4Q13439 2230 aaKnown RBP11.77□□□□□ -0.53
C9orf3-201ENST00000277198 TDRD6O60522 2096 aaKnown RBP11.77□□□□□ -0.53
C9orf3-201ENST00000277198 OR5K3A6NET4 321 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 SERINC4A6NH21 518 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 IMPA2O14732 288 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 SRPX2O60687 465 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-201ENST00000277198 RDH16O75452 317 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 SLC22A5O76082 557 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 LDOC1O95751 146 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-201ENST00000277198 RAF1P04049 648 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 IFNA16P05015 189 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 FTH1P19P0C7X4 201 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 PNMTP11086 282 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 MYF5P13349 255 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 RNH1P13489 461 aaKnown RBP11.77□□□□□ -0.53
C9orf3-201ENST00000277198 MAPK3P27361 379 aaPredicted RBP11.77□□□□□ -0.53
C9orf3-201ENST00000277198 GDNFP39905 211 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 ADH7P40394 386 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 RABIFP47224 123 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 SCAND1P57086 179 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 ARPC4P59998 168 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 ZNF684Q5T5D7 378 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 NUP54Q7Z3B4 507 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 SLC25A45Q8N413 288 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 ARL14Q8N4G2 192 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 RCBTB1Q8NDN9 531 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 OR8H1Q8NGG4 311 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 OR51Q1Q8NH59 317 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 LGALS14Q8TCE9 139 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 GIMAP1Q8WWP7 306 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 CNTNAP3BQ96NU0 1288 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 SORCS2Q96PQ0 1159 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 CNTNAP3Q9BZ76 1288 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 NANSQ9NR45 359 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 KLK13Q9UKR3 277 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 AUP1Q9Y679 476 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 DMXL2Q8TDJ6 3036 aa11.77□□□□□ -0.53
C9orf3-201ENST00000277198 SCN3AQ9NY46 2000 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 SYNDIG1LA6NDD5 238 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 CLDN4O14493 209 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 CSTAP01040 98 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 GALNSP34059 522 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 NAA10P41227 235 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 GRK6P43250 576 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 HCCSP53701 268 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 STX4Q12846 297 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 BIKQ13323 160 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 CAMK2DQ13557 499 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 FAM199XQ6PEV8 388 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 CMTM4Q8IZR5 234 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 FAM71CQ8NEG0 241 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 OR4N2Q8NGD1 307 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 NSMAFQ92636 917 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 NMNAT3Q96T66 252 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 MNTQ99583 582 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 NOX4Q9NPH5 578 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 KLHL9Q9P2J3 617 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 POMT2Q9UKY4 750 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ETV7Q9Y603 341 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 V9GY05 133 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 A0A1W2PPK0 400 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 OR6C68A6NDL8 312 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ZNF593O00488 134 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 FOXS1O43638 330 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ANKRD34CP0C6C1 535 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 CXCL3P19876 107 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 PSMB1P20618 241 aaKnown RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 DPP4P27487 766 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 GPR3P46089 330 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ARRB1P49407 418 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 FUT7Q11130 342 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 EIF2B5Q13144 721 aaKnown RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ST3GAL2Q16842 350 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 PRTGQ2VWP7 1150 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 LINC01590Q5TEZ4 76 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 METTL11BQ5VVY1 283 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ARMC6Q6NXE6 501 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 LYPD8Q6UX82 237 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 ZNF680Q8NEM1 530 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 OR9A4Q8NGU2 314 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 C3orf49Q96BT1 292 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 S100A16Q96FQ6 103 aaKnown RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 LCORQ96JN0 433 aaPredicted RBP11.76□□□□□ -0.53
C9orf3-201ENST00000277198 CITED4Q96RK1 184 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 PDCD1LG2Q9BQ51 273 aa11.76□□□□□ -0.53
C9orf3-201ENST00000277198 PELOQ9BRX2 385 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms