RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 DIRC2Q96SL1 478 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 RSPO3Q9BXY4 272 aaPredicted RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 EGLN3Q9H6Z9 239 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 TRPV4Q9HBA0 871 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 COMMD9Q9P000 198 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 A4GNTQ9UNA3 340 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 NOD1Q9Y239 953 aa8.46□□□□□ -1.06
PDGFC-201ENST00000274071 EXOGQ9Y2C4 368 aaKnown RBP8.46□□□□□ -1.06
PDGFC-201ENST00000274071 TRIP12Q14669 1992 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 NPIPB8E9PQR5 432 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 SMAD9O15198 467 aaKnown RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 OGG1O15527 345 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 HCRTR2O43614 444 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ALOX12BO75342 701 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 RPLP1P05386 114 aaKnown RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 SPARCP09486 303 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 HKR1P10072 659 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 PCBP3P57721 371 aaKnown RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 HMGN3Q15651 99 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ACSM3Q53FZ2 586 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 GGNBP1Q5YKI7 109 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 CLEC20AQ6ZU45 233 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 STEAP2Q8NFT2 490 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 DNAJB3Q8WWF6 145 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 HIST1H2BLQ99880 126 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ADAM2Q99965 735 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 RAB33BQ9H082 229 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 RGCCQ9H4X1 137 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 CBLN4Q9NTU7 201 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 STARD10Q9Y365 291 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 SMIM35A0A1B0GVV1 85 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 MBLAC1A4D2B0 266 aaPredicted RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 M0QZK8 103 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 EFSO43281 561 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 F13BP05160 661 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ACP5P13686 325 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 MC3RP41968 323 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 CCR4P51679 360 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 UBE2V2Q15819 145 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 NCR3LG1Q68D85 454 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 VHLLQ6RSH7 139 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 MEX3DQ86XN8 651 aaKnown RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 C17orf47Q8NEP4 570 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 OR13C8Q8NGS7 320 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 OR13C5Q8NGS8 318 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 OR9A1PQ8NGU1 263 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 OR6N1Q8NGY5 312 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 M1APQ8TC57 530 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 RFKQ969G6 155 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 SMARCD1Q96GM5 515 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 CCDC74BQ96LY2 380 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 DERL3Q96Q80 235 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 WFDC6Q9BQY6 131 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ULBP1Q9BZM6 244 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ATG5Q9H1Y0 275 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 KCNE5Q9UJ90 142 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 AK6Q9Y3D8 172 aaKnown RBP8.45□□□□□ -1.06
PDGFC-201ENST00000274071 MMP24Q9Y5R2 645 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF236Q9UL36 1845 aa8.45□□□□□ -1.06
PDGFC-201ENST00000274071 A0A087WZY1 265 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SIAH2O43255 324 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ADAP1O75689 374 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PGAM2P15259 253 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PRPH2P23942 346 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 HTR2CP28335 458 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 LPAR6P43657 344 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 OR3A1P47881 315 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 DIO1P49895 249 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 RENBPP51606 427 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PRKCZQ05513 592 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF774Q6NX45 483 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PODNL1Q6PEZ8 512 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 CD300LDQ6UXZ3 194 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 FRRS1Q6ZNA5 592 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 NDUFAF7Q7L592 441 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 UBE3DQ7Z6J8 389 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 LRRC56Q8IYG6 542 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SIRT6Q8N6T7 355 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 BBS1Q8NFJ9 593 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 OR4C16Q8NGL9 310 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 OR5M8Q8NGP6 311 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 OR1J1Q8NGS3 322 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 CSGALNACT1Q8TDX6 532 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 RELTQ969Z4 430 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 SAT2Q96F10 170 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-201ENST00000274071 FCRL4Q96PJ5 515 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 OR2M4Q96R27 311 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 RIOK2Q9BVS4 552 aaKnown RBP8.44□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF350Q9GZX5 532 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 APMAPQ9HDC9 416 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 CYTL1Q9NRR1 136 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 HDGFL3Q9Y3E1 203 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 TMED3Q9Y3Q3 217 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 A0A0B4J2A0 478 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 A0A1B0GTI1 187 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 MANSC4A6NHS7 340 aaPredicted RBP8.44□□□□□ -1.06
PDGFC-201ENST00000274071 DCTN6O00399 190 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 XRCC3O43542 346 aa8.44□□□□□ -1.06
PDGFC-201ENST00000274071 PLPP2O43688 288 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms