RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 PNLDC1Q8NA58 520 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 HAVCR2Q8TDQ0 301 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SEC22AQ96IW7 307 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 G6PC3Q9BUM1 346 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SLC38A1Q9H2H9 487 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 IL21RQ9HBE5 538 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 MYEF2Q9P2K5 600 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 A0A1W2PQF6 199 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 ZNF593O00488 134 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SULT1B1O43704 296 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 RAD52P43351 418 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 LUMP51884 338 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 RHEBQ15382 184 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 ZNF585AQ6P3V2 769 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 ULK3Q6PHR2 472 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 C9orf62Q8N4C0 152 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 CHAC2Q8WUX2 184 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 TNFRSF13CQ96RJ3 184 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 ISG20L2Q9H9L3 353 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 A0A0B4J203 849 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 PEX12O00623 359 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SRPX2O60687 465 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 RGS11O94810 467 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SRMP19623 302 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SLC6A1P30531 599 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 CSNK1G2P78368 415 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 INSL4Q14641 139 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 MFSD8Q8NHS3 518 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 PHYHIPQ92561 330 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 KLHL15Q96M94 604 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SERINC2Q96SA4 455 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 NKX6-2Q9C056 277 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 CHMP1AQ9HD42 196 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 SLC6A20Q9NP91 592 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 MBD1Q9UIS9 605 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 CBLCQ9ULV8 474 aa10.62□□□□□ -0.71
CLSTN3-201ENST00000266546 OR8G3PP0DMU2 310 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 LTBRP36941 435 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 RIDAP52758 137 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 PRPS1P60891 318 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 PXKQ7Z7A4 578 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 BPIFB2Q8N4F0 458 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 OR2AJ1Q8NGZ0 328 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 ZC3HAV1LQ96H79 300 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 PFDN5Q99471 154 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 HRASLSQ9HDD0 168 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 PDE7BQ9NP56 450 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 RPS10P5Q9NQ39 176 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 PLXNA4Q9HCM2 1894 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 TRPM6Q9BX84 2022 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 BORCS7-ASMTA0A0B4J1R7 106 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 TVP23AA6NH52 213 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 HCKP08631 526 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 CD53P19397 219 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 ZP3P21754 424 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 RASGEF1BQ0VAM2 473 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 ZNF750Q32MQ0 723 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 CDONQ4KMG0 1287 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 MANEAQ5SRI9 462 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 OR5M10Q6IEU7 315 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 TMEM92Q6UXU6 159 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 LIX1LQ8IVB5 337 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 CSNK1A1LQ8N752 337 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 CADM4Q8NFZ8 388 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 FAM46BQ96A09 425 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 ZNF587Q96SQ5 575 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 VRK1Q99986 396 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 ORAI3Q9BRQ5 295 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 HRH4Q9H3N8 390 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 AUNIPQ9H7T9 357 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 C12orf10Q9HB07 376 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 A0A1B0GUH1 482 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 MEGF11A6BM72 1044 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 H3BUI4 141 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 PHYHO14832 338 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 KHNYNO15037 678 aaKnown RBP10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 SURF4O15260 269 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 DUX1O43812 170 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 DUSP3P51452 185 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 Q7L0L9 218 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 CD163Q86VB7 1156 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 ADGRG3Q86Y34 549 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 FOXRED1Q96CU9 486 aaPredicted RBP10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 HCAR1Q9BXC0 346 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 TBC1D29Q9UFV1 150 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 PLEKHM1Q9Y4G2 1056 aa10.61□□□□□ -0.71
CLSTN3-201ENST00000266546 SPAG17Q6Q759 2223 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 MEIKINA0A087WXM9 373 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 GGT3PA6NGU5 568 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 TXNL1O43396 289 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 UBL4AP11441 157 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 MAOAP21397 527 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 HSD11B1P28845 292 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 RAE1P78406 368 aaKnown RBP10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 SHC2P98077 582 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 SLC25A35Q3KQZ1 300 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 NIPAL3Q6P499 406 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 FAM122BQ7Z309 247 aa10.6□□□□□ -0.71
CLSTN3-201ENST00000266546 METTL27Q8N6F8 245 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms