RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 TMEM123Q8N131 208 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 KDM8Q8N371 416 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 OR51A7Q8NH64 312 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 OR6X1Q8NH79 312 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 MOSPD2Q8NHP6 518 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 ASB5Q8WWX0 329 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 INTS12Q96CB8 462 aaKnown RBP12.66□□□□□ -0.38
SSBP1-201ENST00000265304 LRR1Q96L50 414 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 ADAD1Q96M93 576 aaKnown RBP12.66□□□□□ -0.38
SSBP1-201ENST00000265304 NIPSNAP1Q9BPW8 284 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 TXNIPQ9H3M7 391 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 PIGMQ9H3S5 423 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 CDH10Q9Y6N8 788 aa12.66□□□□□ -0.38
SSBP1-201ENST00000265304 ADGRG4Q8IZF6 3080 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 TRAV27A0A087WT01 109 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 OR6C65A6NJZ3 312 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 BLOC1S5-TXNDC5H3BN57 136 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 IMPA2O14732 288 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 MSTNO14793 375 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 OR6A2O95222 327 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 ALPLP05186 524 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 CD14P08571 375 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 HLA-DOBP13765 273 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 ZNF133P52736 654 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-201ENST00000265304 SMSP52788 366 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 FOXD4Q12950 439 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-201ENST00000265304 RCN1Q15293 331 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 HIST3H3Q16695 136 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 SLC25A35Q3KQZ1 300 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 ALG10Q5BKT4 473 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 TMEM201Q5SNT2 666 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 PPP4R4Q6NUP7 873 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 KLHL17Q6TDP4 642 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 NUFIP2Q7Z417 695 aaKnown RBP12.65□□□□□ -0.38
SSBP1-201ENST00000265304 BTLAQ7Z6A9 289 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 STK32CQ86UX6 486 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 MEX3DQ86XN8 651 aaKnown RBP12.65□□□□□ -0.38
SSBP1-201ENST00000265304 LIX1LQ8IVB5 337 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 UEVLDQ8IX04 471 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 MCEMP1Q8IX19 187 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 BOD1Q96IK1 185 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 ZNF385AQ96PM9 386 aaKnown RBP12.65□□□□□ -0.38
SSBP1-201ENST00000265304 MRPL13Q9BYD1 178 aaKnown RBP12.65□□□□□ -0.38
SSBP1-201ENST00000265304 UCK2Q9BZX2 261 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 SEMA6AQ9H2E6 1030 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 OR52D1Q9H346 318 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 C8orf4Q9NR00 106 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 INIPQ9NRY2 104 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 FOXD3Q9UJU5 478 aaPredicted RBP12.65□□□□□ -0.38
SSBP1-201ENST00000265304 EMC9Q9Y3B6 208 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 PKDREJQ9NTG1 2253 aa12.65□□□□□ -0.38
SSBP1-201ENST00000265304 A8MXE2 369 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 PDLIM1O00151 329 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 BHLHE40O14503 412 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 AHCYL1O43865 530 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 OSMP13725 252 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF23P17027 643 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 STK11Q15831 433 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 FAM205BPQ63HN1 556 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 GPR139Q6DWJ6 353 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 NCCRP1Q6ZVX7 275 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-201ENST00000265304 SLC35D2Q76EJ3 337 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 MRGPRGQ86SM5 289 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 GCNT2Q8N0V5 402 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 LNX2Q8N448 690 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF808Q8N4W9 903 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-201ENST00000265304 ARIH2OSQ8N7S6 290 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF519Q8TB69 540 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 ITLN2Q8WWU7 325 aaPredicted RBP12.64□□□□□ -0.39
SSBP1-201ENST00000265304 NMD3Q96D46 503 aaKnown RBP12.64□□□□□ -0.39
SSBP1-201ENST00000265304 DDOQ99489 341 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 RBM4BQ9BQ04 359 aaKnown RBP12.64□□□□□ -0.39
SSBP1-201ENST00000265304 C9orf16Q9BUW7 83 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 RBM4Q9BWF3 364 aaKnown RBP12.64□□□□□ -0.39
SSBP1-201ENST00000265304 LINC00470Q9BZP3 86 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 RNPEPL1Q9HAU8 725 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 MALT1Q9UDY8 824 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 SH3BGRL2Q9UJC5 107 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 POFUT2Q9Y2G5 429 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 ABCA4P78363 2273 aa12.64□□□□□ -0.39
SSBP1-201ENST00000265304 COL12A1Q99715 3063 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 MCIDASD6RGH6 385 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 DVL2O14641 736 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 RNF13O43567 381 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 PLGP00747 810 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-201ENST00000265304 IFNGR1P15260 489 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 SLC6A6P31641 620 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 GIPRP48546 466 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 DAP3P51398 398 aaKnown RBP12.63□□□□□ -0.39
SSBP1-201ENST00000265304 CTXN1P60606 82 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 RPL27P61353 136 aaKnown RBP12.63□□□□□ -0.39
SSBP1-201ENST00000265304 ESRRGP62508 458 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 POU3F1Q03052 451 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-201ENST00000265304 C1DQ13901 141 aaKnown RBP12.63□□□□□ -0.39
SSBP1-201ENST00000265304 ACKR1Q16570 336 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
SSBP1-201ENST00000265304 ANKRD34AQ69YU3 496 aa12.63□□□□□ -0.39
SSBP1-201ENST00000265304 VWA1Q6PCB0 445 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms