RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 MAVSQ7Z434 540 aa16.66■□□□□ 0.26
COL5A3-201ENST00000264828 TSSK2Q96PF2 358 aa16.66■□□□□ 0.26
COL5A3-201ENST00000264828 TGFBR3Q03167 851 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 TMEM71Q6P5X7 295 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 TMEM64Q6YI46 380 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 BAGE3Q86Y29 109 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 BAGE2Q86Y30 109 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 OR4N2Q8NGD1 307 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 SYT11Q9BT88 431 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 TGIF2Q9GZN2 237 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 WDR76Q9H967 626 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 SELENOFO60613 162 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 F2RL1P55085 397 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 CAMK2BQ13554 666 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 OR10K2Q6IF99 312 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 STEAP1BQ6NZ63 245 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 SLC46A3Q7Z3Q1 461 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 SLC35B4Q969S0 331 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 CXorf36Q9H7Y0 433 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 H3BQ06 376 aaPredicted RBP16.65■□□□□ 0.26
COL5A3-201ENST00000264828 FOXE1O00358 373 aaPredicted RBP16.65■□□□□ 0.26
COL5A3-201ENST00000264828 OR2T7P0C7T2 308 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 THBS3P49746 956 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 RAB38P57729 211 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 RNF113BQ8IZP6 322 aaKnown RBP16.65■□□□□ 0.26
COL5A3-201ENST00000264828 FRMD1Q8N878 549 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 PLPP7Q8NBV4 271 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 OR52H1Q8NGJ2 320 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 OR2T27Q8NH04 317 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 CHTF18Q8WVB6 975 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 ADAM19Q9H013 955 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 OPA3Q9H6K4 179 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 MRPL22Q9NWU5 206 aaKnown RBP16.65■□□□□ 0.26
COL5A3-201ENST00000264828 GPRIN2O60269 458 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 BIDP55957 195 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 BATF2Q8N1L9 274 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 PGBD5Q8N414 524 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 CPXM2Q8N436 756 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 TIMM29Q9BSF4 260 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 PARP12Q9H0J9 701 aaKnown RBP16.65■□□□□ 0.26
COL5A3-201ENST00000264828 ZNF355PQ9NSJ1 428 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 F10P00742 488 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 OR13C7P0DN81 318 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 FOXK2Q01167 660 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 CATR1Q13166 79 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 STEAP1Q9UHE8 339 aa16.65■□□□□ 0.26
COL5A3-201ENST00000264828 ANXA7P20073 488 aaKnown RBP16.64■□□□□ 0.26
COL5A3-201ENST00000264828 PIGAP37287 484 aa16.64■□□□□ 0.26
COL5A3-201ENST00000264828 Q499Y3 187 aa16.64■□□□□ 0.26
COL5A3-201ENST00000264828 RBMS3Q6XE24 437 aaKnown RBP16.64■□□□□ 0.26
COL5A3-201ENST00000264828 CLEC14AQ86T13 490 aa16.64■□□□□ 0.26
COL5A3-201ENST00000264828 RBPMSQ93062 196 aaKnown RBP16.64■□□□□ 0.26
COL5A3-201ENST00000264828 WDR83Q9BRX9 315 aaKnown RBP16.64■□□□□ 0.26
COL5A3-201ENST00000264828 OR11A1Q9GZK7 315 aa16.64■□□□□ 0.26
COL5A3-201ENST00000264828 SMCO4Q9NRQ5 59 aa16.64■□□□□ 0.26
COL5A3-201ENST00000264828 KRBOX1C9JBD0 128 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 HLA-FP30511 346 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 TAGLN2P37802 199 aaKnown RBP16.64■□□□□ 0.25
COL5A3-201ENST00000264828 PRDX1Q06830 199 aaKnown RBP16.64■□□□□ 0.25
COL5A3-201ENST00000264828 CRMP1Q14194 572 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 PHLDA2Q53GA4 152 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 GAREM2Q75VX8 874 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 SMIM15Q7Z3B0 74 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 FGGYQ96C11 551 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 PSD2Q9BQI7 771 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 MED17Q9NVC6 651 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 CCSO14618 274 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 IMPA1P29218 277 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 ADIRFQ15847 76 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 TMEM31Q5JXX7 168 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 NXNL2Q5VZ03 156 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 RNF141Q8WVD5 230 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 KCTD12Q96CX2 325 aaKnown RBP16.64■□□□□ 0.25
COL5A3-201ENST00000264828 ZNF416Q9BWM5 594 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 SERINC4A6NH21 518 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 KCNK5O95279 499 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 FURINP09958 794 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 NPY4RP50391 375 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 NKAIN2Q5VXU1 208 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 TRNP1Q6NT89 227 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 RASD2Q96D21 266 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 URGCP-MRPS24S4R325 110 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 PRAMEF4O60810 478 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 CNR1P21554 472 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 HSD17B11Q8NBQ5 300 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 PIGTQ969N2 578 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 PDLIM5Q96HC4 596 aaKnown RBP16.64■□□□□ 0.25
COL5A3-201ENST00000264828 DCLRE1CQ96SD1 692 aaKnown RBP16.64■□□□□ 0.25
COL5A3-201ENST00000264828 SIAEQ9HAT2 523 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 GNG12Q9UBI6 72 aa16.64■□□□□ 0.25
COL5A3-201ENST00000264828 DIMT1Q9UNQ2 313 aaKnown RBP16.64■□□□□ 0.25
COL5A3-201ENST00000264828 ADAM23O75077 832 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 DPP4P27487 766 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 KIAA1024LP59773 190 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 AMBRA1Q9C0C7 1298 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 PCDHGA5Q9Y5G8 931 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 OR6C76A6NM76 312 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 HOXD9P28356 352 aaPredicted RBP16.63■□□□□ 0.25
COL5A3-201ENST00000264828 LYSMD4Q5XG99 296 aa16.63■□□□□ 0.25
COL5A3-201ENST00000264828 GDF7Q7Z4P5 450 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms