RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MARVELD2Q8N4S9 558 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 LSM14AQ8ND56 463 aaKnown RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 SDR9C7Q8NEX9 313 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 BBS1Q8NFJ9 593 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 OR52E2Q8NGJ4 325 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 RHOXF1Q8NHV9 184 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 FNDC9Q8TBE3 224 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 FAR1Q8WVX9 515 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 OTULINQ96BN8 352 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 GPR137Q96N19 417 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 GPX7Q96SL4 187 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 NMNAT3Q96T66 252 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 APOL4Q9BPW4 351 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 NAA11Q9BSU3 229 aaPredicted RBP8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 AMBNQ9NP70 447 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 DNAJC27Q9NZQ0 273 aa8.69□□□□□ -1.02
SNRNP40-201ENST00000263694 COL6A6A6NMZ7 2263 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 FREM1Q5H8C1 2179 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 A0A1W2PRG6 482 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 EIF1BO60739 113 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 ENTPD6O75354 484 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 AQP8O94778 261 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 RPSAP08865 295 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 CLUP10909 449 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 CPN1P15169 458 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 NTF4P34130 210 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 RPS6KA3P51812 740 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 NUDT6P53370 316 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.68□□□□□ -1.026e-7■■□□□ 12.5
SNRNP40-201ENST00000263694 KLRB1Q12918 225 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 IL18R1Q13478 541 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 CRMP1Q14194 572 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 PON3Q15166 354 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF239Q16600 458 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 MESTQ5EB52 335 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 PLBD1Q6P4A8 553 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 UGT2A3Q6UWM9 527 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC35D2Q76EJ3 337 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 FCRLAQ7L513 359 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 PXKQ7Z7A4 578 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 UEVLDQ8IX04 471 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF786Q8N393 782 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC37A3Q8NCC5 494 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 SETD9Q8NE22 299 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 ABHD3Q8WU67 409 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 PLEKHA8Q96JA3 519 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 OXGR1Q96P68 337 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF385AQ96PM9 386 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC38A2Q96QD8 506 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 RHNO1Q9BSD3 238 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 TXNIPQ9H3M7 391 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 HINT3Q9NQE9 182 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 CMC2Q9NRP2 79 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 PNPLA3Q9NST1 481 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 GRHPRQ9UBQ7 328 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 CLEC4AQ9UMR7 237 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 LRCH1Q9Y2L9 728 aa8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 PHF3Q92576 2039 aaKnown RBP8.68□□□□□ -1.02
SNRNP40-201ENST00000263694 EPG5Q9HCE0 2579 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 A0A1W2PNV4 684 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 OR6C68A6NDL8 312 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF716A6NP11 495 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 TTLL8A6PVC2 850 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 CLCA1A8K7I4 914 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ERVH48-1M5A8F1 160 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ARPC3O15145 178 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ARHGEF9O43307 516 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 TRAF3IP2O43734 574 aaPredicted RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 XPNPEP2O43895 674 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 SYNGR4O95473 234 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 TGM6O95932 706 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 BCL10O95999 233 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 HMGN1P05114 100 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 GYPBP06028 91 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF43P17038 809 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 SDHAP31040 664 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 TDGF1P3P51864 188 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 BIDP55957 195 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 CLDN17P56750 224 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 RPS3AP61247 264 aaKnown RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 RPL27P61353 136 aaKnown RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ITGADQ13349 1161 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 CAMK2DQ13557 499 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 C1DQ13901 141 aaKnown RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 SLC17A1Q14916 467 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 EMC4Q5J8M3 183 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 C6orf141Q5SZD1 244 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ARMC4Q5T2S8 1044 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 EEF1A1P5Q5VTE0 462 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 CARD17Q5XLA6 110 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZNF585AQ6P3V2 769 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ARHGAP11AQ6P4F7 1023 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 LEG1Q6P5S2 330 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 B3GLCTQ6Y288 498 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 C3P1Q6ZMU1 363 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 CHMP1BQ7LBR1 199 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 DEPDC4Q8N2C3 294 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 ZIC4Q8N9L1 334 aa8.67□□□□□ -1.02
SNRNP40-201ENST00000263694 SYT14Q8NB59 555 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms