RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 PPA2Q9H2U2 334 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 GPN1Q9HCN4 374 aaPredicted RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 H0YC42 278 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 PLRG1O43660 514 aaKnown RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 GALR3O60755 368 aaPredicted RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 SULT1A3P0DMM9 295 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 SULT1A4P0DMN0 295 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 ST6GAL1P15907 406 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 SLC2A5P22732 501 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 PTH2RP49190 550 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 GPR143P51810 404 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 PLAURQ03405 335 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 AANATQ16613 207 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 C4orf46Q504U0 113 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 METTL11BQ5VVY1 283 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 Q6ZSR6 202 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 OR51D1Q8NGF3 324 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 SORCS2Q96PQ0 1159 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 PNO1Q9NRX1 252 aaKnown RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 TRAV18A0A075B6X5 111 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 CYR61O00622 381 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 RBBP9O75884 186 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 OR6A2O95222 327 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 AK1P00568 194 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 HIST1H2ABP04908 130 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 GTF2F2P13984 249 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 RPL35P42766 123 aaKnown RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 CDKN2AP42771 156 aaKnown RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 MAZP56270 477 aaKnown RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 BIKQ13323 160 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 RTL10Q7L3V2 364 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 HIST3H2AQ7L7L0 130 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 POMGNT2Q8NAT1 580 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 OR10AC1Q8NH08 325 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 HIST1H2ACQ93077 130 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 MMABQ96EY8 250 aaPredicted RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 BMFQ96LC9 184 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 RBP7Q96R05 134 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 MYADMQ96S97 322 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 SFXN1Q9H9B4 322 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 ZMAT3Q9HA38 289 aaKnown RBP11.56□□□□□ -0.56
LIG1-201ENST00000263274 SOHLH2Q9NX45 425 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 GDE1Q9NZC3 331 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 PILRAQ9UKJ1 303 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 ENTPD2Q9Y5L3 495 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 RTTNQ86VV8 2226 aa11.56□□□□□ -0.56
LIG1-201ENST00000263274 OGG1O15527 345 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 APBB3O95704 486 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 CD53P19397 219 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 POU3F2P20265 443 aaPredicted RBP11.55□□□□□ -0.56
LIG1-201ENST00000263274 MAP2K6P52564 334 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 RPS11P62280 158 aaKnown RBP eCLIP11.55□□□□□ -0.56
LIG1-201ENST00000263274 GUCA2AQ02747 115 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 FHL5Q5TD97 284 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 C3P1Q6ZMU1 363 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 LRRC69Q6ZNQ3 347 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 OVCH1Q7RTY7 1134 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 TMEM106AQ96A25 262 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 OR1F2PQ96R84 312 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 SARGQ9BW04 601 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 GSX2Q9BZM3 304 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 OR8D2Q9GZM6 311 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 SCPEP1Q9HB40 452 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 TRPV4Q9HBA0 871 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 PRTFDC1Q9NRG1 225 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 GRHPRQ9UBQ7 328 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 OR5V1Q9UGF6 321 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 CHRNA9Q9UGM1 479 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 PCDHGA9Q9Y5G4 932 aaKnown RBP11.55□□□□□ -0.56
LIG1-201ENST00000263274 LGALS8O00214 317 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 TACSTD2P09758 323 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 LIPCP11150 499 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 CCKBRP32239 447 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 CBFBQ13951 182 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 LRRC37A5PQ49AS3 106 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 ALG10Q5BKT4 473 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 STPG1Q5TH74 334 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 HACD4Q5VWC8 232 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 TMEM81Q6P7N7 255 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 SLC37A2Q8TED4 501 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 ASB12Q8WXK4 309 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 ST8SIA4Q92187 359 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 ANKRD9Q96BM1 317 aaPredicted RBP11.55□□□□□ -0.56
LIG1-201ENST00000263274 JAM3Q9BX67 310 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 SYNDIG1Q9H7V2 258 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 FBXL21Q9UKT6 434 aa11.55□□□□□ -0.56
LIG1-201ENST00000263274 NUP210Q8TEM1 1887 aaPredicted RBP11.55□□□□□ -0.56
LIG1-201ENST00000263274 FAM25EA8MYX2 175 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 AIPO00170 330 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 KDM4BO94953 1096 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 ECDO95905 644 aaPredicted RBP11.54□□□□□ -0.56
LIG1-201ENST00000263274 GAAP10253 952 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 FNTBP49356 437 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 P2RX1P51575 399 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 ARFIP1P53367 373 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 LTBQ06643 244 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 PLA2G7Q13093 441 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 ALG11Q2TAA5 492 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 C1orf53Q5VUE5 145 aa11.54□□□□□ -0.56
LIG1-201ENST00000263274 STAC2Q6ZMT1 411 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms