RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 ZNF556Q9HAH1 456 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 USE1Q9NZ43 259 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 REV1Q9UBZ9 1251 aa24.67■■□□□ 1.54
SMARCD3-201ENST00000262188 ADAP00813 363 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 TP53P04637 393 aaPredicted RBP24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 IFNGR2P38484 337 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 NKX2-5P52952 324 aaPredicted RBP24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 NEDD8Q15843 81 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 CTU2Q2VPK5 515 aaKnown RBP24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 TMPRSS11FQ6ZWK6 438 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 CDK20Q8IZL9 346 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 LINC00471Q8N535 108 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 GALNT11Q8NCW6 608 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 OR6Q1Q8NGQ2 317 aa24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 SPIN1Q9Y657 262 aaPredicted RBP24.66■■□□□ 1.54
SMARCD3-201ENST00000262188 FTCDNL1E5RQL4 147 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 CFL1P23528 166 aaKnown RBP24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 FPR3P25089 353 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 CAPGP40121 348 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 TSPAN31Q12999 210 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 FHL1Q13642 323 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 FAM69AQ5T7M9 428 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 KCTD20Q7Z5Y7 419 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 KLHL15Q96M94 604 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 TNFRSF13CQ96RJ3 184 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 PLA2G12AQ9BZM1 189 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 NANSQ9NR45 359 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 UNC119BA6NIH7 251 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 CENPXA8MT69 81 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 ERVH48-1M5A8F1 160 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 HOXB1P14653 301 aaPredicted RBP24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 CHMP24386 653 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 GRPRP30550 384 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 OR3A3P47888 321 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 DIO1P49895 249 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 FXYD6P3P58550 94 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 AGAP6Q5VW22 663 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 FAM180AQ6UWF9 173 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 SLC25A43Q8WUT9 341 aaPredicted RBP24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 MBOAT4Q96T53 435 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 TOR3AQ9H497 397 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 RIBC2Q9H4K1 309 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 TMEM5Q9Y2B1 443 aa24.65■■□□□ 1.54
SMARCD3-201ENST00000262188 LIPT2A6NK58 231 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 UPK1BO75841 260 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 IGHG3P01860 377 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 POU1F1P28069 291 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 CLDN18P56856 261 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 OR2B6P58173 313 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 MRPS15P82914 257 aaKnown RBP24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 OAFQ86UD1 273 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 SRXN1Q9BYN0 137 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 POTEKPQ9BYX7 375 aa24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 KRCC1Q9NPI7 259 aaPredicted RBP24.64■■□□□ 1.54
SMARCD3-201ENST00000262188 IGHV3-15A0A0B4J1V0 119 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 ZNF814B7Z6K7 855 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 H0YAE9 185 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 AKR7A3O95154 331 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 USP51Q70EK9 711 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 SNRNP40Q96DI7 357 aaKnown RBP24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 ZNF845Q96IR2 970 aaPredicted RBP24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 TIMP4Q99727 224 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 A0A1B0GTH9 108 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 BLOC1S5-TXNDC5H3BN57 136 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 M0R082 166 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 SULT2B1O00204 365 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 TRAPPC2P0DI81 140 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 TRAPPC2BP0DI82 140 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 TMEM236Q5W0B7 351 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 VASNQ6EMK4 673 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 TMPPEQ6ZT21 453 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 KDM8Q8N371 416 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 OR8D4Q8NGM9 314 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 MOSPD2Q8NHP6 518 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 ZNF417Q8TAU3 575 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 ZNF587Q96SQ5 575 aaPredicted RBP24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 LIN7BQ9HAP6 207 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 POFUT2Q9Y2G5 429 aa24.63■■□□□ 1.53
SMARCD3-201ENST00000262188 HPRP00739 348 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 ASAH2BP0C7U1 165 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 EIF1AXP47813 144 aaKnown RBP24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 CLEC12AQ5QGZ9 265 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 RBM48Q5RL73 367 aaKnown RBP24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 THSD4Q6ZMP0 1018 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 DHRSXQ8N5I4 330 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 OR6F1Q8NGZ6 308 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 RHOXF1Q8NHV9 184 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 MAP6Q96JE9 813 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 ADGRG7Q96K78 797 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 KCNN2Q9H2S1 579 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 MCCC2Q9HCC0 563 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 ASF1BQ9NVP2 202 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 SMPD3Q9NY59 655 aaPredicted RBP24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 SIGLEC7Q9Y286 467 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 NOSIPQ9Y314 301 aaKnown RBP24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 EPG5Q9HCE0 2579 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 SPTA1P02549 2419 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 NPIPA2E9PIF3 369 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 NPIPA3F8WFD2 350 aa24.62■■□□□ 1.53
SMARCD3-201ENST00000262188 CXCL13O43927 109 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms