RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 GPR4P46093 362 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 SLC6A8P48029 635 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 PTH2RP49190 550 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 TMBIM6P55061 237 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 COPZ1P61923 177 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 FOXO1Q12778 655 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 GINS1Q14691 196 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 ACKR1Q16570 336 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 ACSF3Q4G176 576 aaPredicted RBP11.89□□□□□ -0.51
SGCA-201ENST00000262018 TMEM201Q5SNT2 666 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 WBP2NLQ6ICG8 309 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 CASP12Q6UXS9 341 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 ZNF620Q6ZNG0 422 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 PTCHD4Q6ZW05 846 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 KCTD8Q6ZWB6 473 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 SPARTQ8N0X7 666 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 CADM2Q8N3J6 435 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 SVOPQ8N4V2 548 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 MAPK1IP1LQ8NDC0 245 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 OR8D4Q8NGM9 314 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 TEX47Q8TBZ9 253 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 RNF217Q8TC41 542 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 RNF138Q8WVD3 245 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 OSTF1Q92882 214 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 C3orf49Q96BT1 292 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 SIGLEC11Q96RL6 698 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 NODALQ96S42 347 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 PLA2G12AQ9BZM1 189 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 RTN4RQ9BZR6 473 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 EGLN3Q9H6Z9 239 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 FKBP14Q9NWM8 211 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 SELENONQ9NZV5 590 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 ICAM5Q9UMF0 924 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 CARD8Q9Y2G2 431 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 CDH10Q9Y6N8 788 aa11.89□□□□□ -0.51
SGCA-201ENST00000262018 A0A087WUJ7 227 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 UNC119BA6NIH7 251 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 PTGES3LE9PB15 166 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 M0R129 80 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 CDC42EP2O14613 210 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 NDUFB5O43674 189 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 MAKP20794 623 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 CALRP27797 417 aaKnown RBP11.88□□□□□ -0.51
SGCA-201ENST00000262018 EVI2BP34910 448 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 TIMP3P35625 211 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 EFNB1P98172 346 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 RUNX1T1Q06455 604 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 LSAMPQ13449 338 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 HYAL4Q2M3T9 481 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 KRTAP24-1Q3LI83 254 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 ACSM5Q6NUN0 579 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 SLC27A4Q6P1M0 643 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 CBLN3Q6UW01 205 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 NUP54Q7Z3B4 507 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 MARCH3Q86UD3 253 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 CDK20Q8IZL9 346 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 IQCF1Q8N6M8 205 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 ZNF540Q8NDQ6 660 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 OR8J1Q8NGP2 316 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 PAQR8Q8TEZ7 354 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 FCGR1BQ92637 280 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 HGDQ93099 445 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 BPIFA2Q96DR5 249 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 DOK1Q99704 481 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 TBL1XR1Q9BZK7 514 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 GSX2Q9BZM3 304 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 SLC6A15Q9H2J7 730 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 C12orf10Q9HB07 376 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 MEPEQ9NQ76 525 aaPredicted RBP11.88□□□□□ -0.51
SGCA-201ENST00000262018 YAE1D1Q9NRH1 226 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 C20orf141Q9NUB4 165 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 CLN6Q9NWW5 311 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 PSORS1C1Q9UIG5 152 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 CEPT1Q9Y6K0 416 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
SGCA-201ENST00000262018 AHRRA9YTQ3 701 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 DCKP27707 260 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 PCYT1AP49585 367 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 FBXW4P57775 412 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 ZNF117Q03924 483 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 PIGFQ07326 219 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 TNK1Q13470 666 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 OCLNQ16625 522 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 SLC25A30Q5SVS4 291 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 SLC22A10Q63ZE4 541 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 XAF1Q6GPH4 301 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 LINC00299Q6ZSB3 139 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 ATG4DQ86TL0 474 aaPredicted RBP11.87□□□□□ -0.51
SGCA-201ENST00000262018 MISPQ8IVT2 679 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 TMCO5AQ8N6Q1 288 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 OR10G3Q8NGC4 313 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 RAB2BQ8WUD1 216 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 TMIGD2Q96BF3 282 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 Q96MT0 163 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 RBM24Q9BX46 236 aaKnown RBP11.87□□□□□ -0.51
SGCA-201ENST00000262018 TSSK6Q9BXA6 273 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 SLC19A3Q9BZV2 496 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 SH2D2AQ9NP31 389 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 SACM1LQ9NTJ5 587 aa11.87□□□□□ -0.51
SGCA-201ENST00000262018 TVP23BQ9NYZ1 205 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms