RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 ATRAIDQ6UW56 229 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 PARGQ86W56 976 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 ZNF595Q8IYB9 648 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 SLC43A2Q8N370 569 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 SPICQ8N5J4 248 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 OR4C3Q8NH37 302 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 THAP4Q8WY91 577 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 ATOH1Q92858 354 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-201ENST00000261963 ZMYND19Q96E35 227 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-201ENST00000261963 C2orf42Q9NWW7 574 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 WSB2Q9NYS7 404 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-201ENST00000261963 ST6GALNAC2Q9UJ37 374 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 MCIDASD6RGH6 385 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 TEX46H3BTG2 121 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 GSTZ1O43708 216 aaPredicted RBP20.62■□□□□ 0.89
MCF2L-201ENST00000261963 APOC3P02656 99 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 MAOAP21397 527 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 PYCR1P32322 319 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 VEGFCP49767 419 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 TRAM1Q15629 374 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 FAM69AQ5T7M9 428 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 C16orf52Q8NHV5 167 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 DGAT2Q96PD7 388 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 USB1Q9BQ65 265 aaKnown RBP20.62■□□□□ 0.89
MCF2L-201ENST00000261963 TMPRSS13Q9BYE2 586 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 TTTY10Q9BZA0 68 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 Q9N2J8 555 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 CAMK2AQ9UQM7 478 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 ERVK-19Q9WJR5 959 aa20.62■□□□□ 0.89
MCF2L-201ENST00000261963 A0A1B0GUH1 482 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ANXA2P2A6NMY6 339 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ABCD4O14678 606 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 SRPX2O60687 465 aaPredicted RBP20.61■□□□□ 0.89
MCF2L-201ENST00000261963 PRAMEF2O60811 474 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 RAP2BP61225 183 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ACTC1P68032 377 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ACTA1P68133 377 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 POU4F2Q12837 409 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.61■□□□□ 0.89
MCF2L-201ENST00000261963 MTFR2Q6P444 385 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 EIF4E3Q8N5X7 224 aaKnown RBP20.61■□□□□ 0.89
MCF2L-201ENST00000261963 BCORP1Q8N888 145 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 OR5T2Q8NGG2 359 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 OR13C5Q8NGS8 318 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 OR10A4Q9H209 315 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 MRPS33Q9Y291 106 aaKnown RBP20.61■□□□□ 0.89
MCF2L-201ENST00000261963 IER3IP1Q9Y5U9 82 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 A0A1W2PPC4 97 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 MAGEB4O15481 346 aaPredicted RBP20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ITGA10O75578 1167 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 NDUFB2O95178 105 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 PSMB1P20618 241 aaKnown RBP20.61■□□□□ 0.89
MCF2L-201ENST00000261963 S100A11P31949 105 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 GDNFP39905 211 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 BAIAP2L2Q6UXY1 529 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 PRSS45Q7RTY3 260 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ZNF454Q8N9F8 522 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 FAM98AQ8NCA5 519 aaKnown RBP20.61■□□□□ 0.89
MCF2L-201ENST00000261963 OR51L1Q8NGJ5 315 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 GHSRQ92847 366 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 KLHDC7BQ96G42 594 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 G6PC3Q9BUM1 346 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ICAM5Q9UMF0 924 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 ADAM18Q9Y3Q7 739 aa20.61■□□□□ 0.89
MCF2L-201ENST00000261963 SUSD5O60279 629 aa20.6■□□□□ 0.89
MCF2L-201ENST00000261963 GMDSO60547 372 aa20.6■□□□□ 0.89
MCF2L-201ENST00000261963 PGDP52209 483 aa20.6■□□□□ 0.89
MCF2L-201ENST00000261963 PDZD9Q8IXQ8 264 aa20.6■□□□□ 0.89
MCF2L-201ENST00000261963 FAM160A2Q8N612 972 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-201ENST00000261963 MKKSQ9NPJ1 570 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-201ENST00000261963 NANSQ9NR45 359 aa20.6■□□□□ 0.89
MCF2L-201ENST00000261963 TMEM184BQ9Y519 407 aaPredicted RBP20.6■□□□□ 0.89
MCF2L-201ENST00000261963 NPFFR2Q9Y5X5 522 aa20.6■□□□□ 0.89
MCF2L-201ENST00000261963 SERINC4A6NH21 518 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 EFCAB7A8K855 629 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 SELENOFO60613 162 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 NSA2O95478 260 aaKnown RBP20.59■□□□□ 0.89
MCF2L-201ENST00000261963 CSTAP01040 98 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 RAB3BP20337 219 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 MAOBP27338 520 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 BLKP51451 505 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 NRG3P56975 720 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 PSMA6P60900 246 aaKnown RBP20.59■□□□□ 0.89
MCF2L-201ENST00000261963 FUT7Q11130 342 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 TP53I3Q53FA7 332 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 ACSM3Q53FZ2 586 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 NAXDQ8IW45 347 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 PM20D2Q8IYS1 436 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 METTL27Q8N6F8 245 aaPredicted RBP20.59■□□□□ 0.89
MCF2L-201ENST00000261963 SMIM4Q8WVI0 70 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 ZNRF4Q8WWF5 429 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 PIGKQ92643 395 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 OR10A5Q9H207 317 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 CA10Q9NS85 328 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 GPR160Q9UJ42 338 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 PRUNE2Q8WUY3 3088 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 A0A087WUJ7 227 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 D6RAR5 112 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 CLPSP04118 112 aa20.59■□□□□ 0.89
MCF2L-201ENST00000261963 SNRPBP14678 240 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms