RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 USP43Q70EL4 1123 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 SSX6Q7RTT6 188 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 KLBQ86Z14 1044 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 OR1J4Q8NGS1 313 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 CORINQ9Y5Q5 1042 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 PMF1-BGLAPU3KQ54 211 aa20.13■□□□□ 0.81
SIX3-201ENST00000260653 FAM186AA6NE01 2351 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 LIPT2A6NK58 231 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 SELENOFO60613 162 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 F10P00742 488 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 HLA-DOBP13765 273 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 SLC25A1P53007 311 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 PUDPQ08623 228 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 SLC35D3Q5M8T2 416 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 DCAF10Q5QP82 559 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 TMPRSS11AQ6ZMR5 421 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 ARIH2OSQ8N7S6 290 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 POMGNT2Q8NAT1 580 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 UFD1Q92890 307 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 ALG12Q9BV10 488 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 POTEKPQ9BYX7 375 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 TTTY10Q9BZA0 68 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 SYT4Q9H2B2 425 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 STUB1Q9UNE7 303 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 AKAP8O43823 692 aaKnown RBP20.12■□□□□ 0.81
SIX3-201ENST00000260653 GLCEO94923 617 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 DPP4P27487 766 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 DNASE1L1P49184 302 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 RPL27P61353 136 aaKnown RBP20.12■□□□□ 0.81
SIX3-201ENST00000260653 MFSD13AQ14CX5 517 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 NXPE2Q96DL1 559 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 FAM117AQ9C073 453 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 SRA1Q9HD15 236 aaKnown RBP20.12■□□□□ 0.81
SIX3-201ENST00000260653 ASPMQ8IZT6 3477 aa20.12■□□□□ 0.81
SIX3-201ENST00000260653 MS4A18H0YCH9 400 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 SHC1P29353 583 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 ACVR1BP36896 505 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 EIF1P41567 113 aaKnown RBP20.11■□□□□ 0.81
SIX3-201ENST00000260653 RPS25P62851 125 aaKnown RBP20.11■□□□□ 0.81
SIX3-201ENST00000260653 MS4A18Q3C1V0 323 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 TIGD3Q6B0B8 471 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 H1FNTQ75WM6 255 aaPredicted RBP20.11■□□□□ 0.81
SIX3-201ENST00000260653 ZNF227Q86WZ6 799 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 ZNF519Q8TB69 540 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 ZBTB8AQ96BR9 441 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 TXNIPQ9H3M7 391 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 RERGLQ9H628 205 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 FREM3P0C091 2139 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 CDRT15L2A8MXV6 281 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 P04436 131 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 UGT2B10P36537 528 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 ACTC1P68032 377 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 ACTA1P68133 377 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 ACSM1Q08AH1 577 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 MELKQ14680 651 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 DTX1Q86Y01 620 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 PM20D2Q8IYS1 436 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 OR6V1Q8N148 313 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 SCAIQ8N9R8 606 aa20.11■□□□□ 0.81
SIX3-201ENST00000260653 SF3B6Q9Y3B4 125 aaKnown RBP20.11■□□□□ 0.81
SIX3-201ENST00000260653 PTPRBP23467 1997 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 A0A1W2PNR3 127 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 XKRYO14609 159 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 TPPPO94811 219 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 AKR7A3O95154 331 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 ADH6P28332 368 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 RBMS1P29558 406 aaKnown RBP20.1■□□□□ 0.81
SIX3-201ENST00000260653 SFTPDP35247 375 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 SERPINB10P48595 397 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 TLE3Q04726 772 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 DGUOKQ16854 277 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.1■□□□□ 0.81
SIX3-201ENST00000260653 SLC35F2Q8IXU6 374 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 ZNF511Q8NB15 262 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 KBTBD8Q8NFY9 601 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 TM9SF2Q99805 663 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 SLIRPQ9GZT3 109 aaKnown RBP20.1■□□□□ 0.81
SIX3-201ENST00000260653 CHST11Q9NPF2 352 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 ALKBH4Q9NXW9 302 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 STMN3Q9NZ72 180 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 ZMIZ1Q9ULJ6 1067 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 SNX4O95219 450 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 RENP00797 406 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 CELP19835 753 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 CYB561P49447 251 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 OC90Q02509 493 aaPredicted RBP20.1■□□□□ 0.81
SIX3-201ENST00000260653 SELENBP1Q13228 472 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 GTPBP8Q8N3Z3 284 aaPredicted RBP20.1■□□□□ 0.81
SIX3-201ENST00000260653 TMEM41AQ96HV5 264 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 OR5B2Q96R09 309 aa20.1■□□□□ 0.81
SIX3-201ENST00000260653 RYDENQ9NUL5 291 aaKnown RBP20.1■□□□□ 0.81
SIX3-201ENST00000260653 A0A087WZY1 265 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 IGHMP01871 453 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 CSRP1P21291 193 aaKnown RBP20.09■□□□□ 0.81
SIX3-201ENST00000260653 DSCR4P56555 118 aaPredicted RBP20.09■□□□□ 0.81
SIX3-201ENST00000260653 JMJD6Q6NYC1 403 aaPredicted RBP20.09■□□□□ 0.81
SIX3-201ENST00000260653 ADCK1Q86TW2 530 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 C4orf36Q96KX1 117 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 SACM1LQ9NTJ5 587 aa20.09■□□□□ 0.81
SIX3-201ENST00000260653 BABAM2Q9NXR7 383 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms