RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 GRM7Q14831 915 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 PET117Q6UWS5 81 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 ABHD12BQ7Z5M8 362 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 LGI3Q8N145 548 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 OR2AK2Q8NG84 335 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 UCN3Q969E3 161 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 ZNF566Q969W8 418 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 REEP6Q96HR9 211 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 TMEM59Q9BXS4 323 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 AMBRA1Q9C0C7 1298 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 PARP12Q9H0J9 701 aaKnown RBP12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 UBQLN3Q9H347 655 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 R3HDMLQ9H3Y0 253 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 CLEC2DQ9UHP7 191 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 J3KTA2 159 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 LILRB3O75022 631 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 DHPSP49366 369 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 PCBP4P57723 403 aaKnown RBP12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 TPPP2P59282 170 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 BDH1Q02338 343 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 RPUSD3Q6P087 351 aaKnown RBP12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 TMEM71Q6P5X7 295 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 USP51Q70EK9 711 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 KLHDC8AQ8IYD2 350 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 OR1S2Q8NGQ3 325 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 KCNG3Q8TAE7 436 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 ANKRD9Q96BM1 317 aaPredicted RBP12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 ELOVL3Q9HB03 270 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 MED9Q9NWA0 146 aa12.22□□□□□ -0.45
PCDHGA3-201ENST00000253812 CCSO14618 274 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 PIM1P11309 404 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 CLDN10P78369 228 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 AQP6Q13520 282 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 UBXN2BQ14CS0 331 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 SOWAHCQ53LP3 525 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 RAB6CQ53S08 254 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 PRSS45Q7RTY3 260 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 CNTN4Q8IWV2 1026 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 COMMD1Q8N668 190 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 DVL3Q92997 716 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 SLC41A2Q96JW4 573 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 SMG9Q9H0W8 520 aaKnown RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 OR51I2Q9H344 312 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 ZNF160Q9HCG1 818 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 USF1P22415 310 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 RING1Q06587 406 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 C9orf152Q5JTZ5 239 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 FAM74A1Q5RGS3 127 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 LRRTM1Q86UE6 522 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 LSMEM2Q8N112 164 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 USB1Q9BQ65 265 aaKnown RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 NAA11Q9BSU3 229 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 SELENOIQ9C0D9 397 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 RNF167Q9H6Y7 350 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 CXXC1Q9P0U4 656 aaPredicted RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 YTHDF2Q9Y5A9 579 aaKnown RBP12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 WNT6Q9Y6F9 365 aa12.21□□□□□ -0.45
PCDHGA3-201ENST00000253812 EDN1P05305 212 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF28P17035 718 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 CD68P34810 354 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 REEP5Q00765 189 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 ZNF90Q03938 601 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 KIAA0319Q5VV43 1072 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 RNF111Q6ZNA4 994 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 MAVSQ7Z434 540 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 RNF113BQ8IZP6 322 aaKnown RBP12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 GCNT2Q8N0V5 402 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 TMEM217Q8N7C4 229 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR51A4Q8NGJ6 313 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR8D4Q8NGM9 314 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR52I2Q8NH67 350 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 CYB5D2Q8WUJ1 264 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 ADIPOR1Q96A54 375 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 ARHGDIGQ99819 225 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 RHOFQ9HBH0 211 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 RAB9BQ9NP90 201 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 C19orf25Q9UFG5 118 aaPredicted RBP12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 AK3Q9UIJ7 227 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 NDRG4Q9ULP0 352 aaKnown RBP12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 ARL2-SNX15V9GYD0 113 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 MYH8P13535 1937 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 GPR31O00270 319 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 OR8G3PP0DMU2 310 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 C2orf27AQ580R0 203 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM209AQ5JX71 171 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 PM20D1Q6GTS8 502 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 C19orf35Q6ZS72 473 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 NPWQ8N729 165 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 DAZLQ92904 295 aaKnown RBP12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 RASD2Q96D21 266 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 FAM122AQ96E09 287 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 EGLN2Q96KS0 407 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 STEAP1Q9UHE8 339 aa12.21□□□□□ -0.46
PCDHGA3-201ENST00000253812 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA3-201ENST00000253812 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.2□□□□□ -0.46
PCDHGA3-201ENST00000253812 C9J4A7 227 aa12.2□□□□□ -0.46
PCDHGA3-201ENST00000253812 AQP8O94778 261 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms